RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ID3Q02535 119 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 TNFRSF9Q07011 255 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 CD300CQ08708 224 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 SCGB2A2Q13296 93 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 FBLN7Q53RD9 439 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 C16orf82Q7Z2V1 217 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 MMD2Q8IY49 270 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 PIFOQ8TCI5 191 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 WDR89Q96FK6 387 aaPredicted RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 RITA1Q96K30 269 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 SSX3Q99909 188 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 GSX1Q9H4S2 264 aaPredicted RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 METTL1Q9UBP6 276 aaKnown RBP10.43□□□□□ -0.74
CPNE3-205ENST00000522240 TCF19Q9Y242 345 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 ZNF257Q9Y2Q1 563 aa10.43□□□□□ -0.74
CPNE3-205ENST00000522240 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 H3BUX3 64 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 K7EPK0 472 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 MED6O75586 246 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 DEDDO75618 318 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 OR2F2O95006 317 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 LY6G6DO95868 133 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 SLC25A4P12235 298 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 LYL1P12980 280 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 CD24P25063 80 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 S100A10P60903 97 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 PRSS8Q16651 343 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 C5orf64Q2M2E5 130 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 ZFP69Q49AA0 526 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 LRRC37A5PQ49AS3 106 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 C11orf87Q6NUJ2 197 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 PRSS54Q6PEW0 395 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 PPP1R27Q86WC6 154 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 BCL6BQ8N143 479 aaPredicted RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 FAM71E2Q8N5Q1 922 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 OR5R1Q8NH85 324 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 RBMXL1Q96E39 390 aaKnown RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 FBXL15Q9H469 300 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 PLSCR3Q9NRY6 295 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 RCL1Q9Y2P8 373 aaKnown RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 MOB4Q9Y3A3 225 aa10.42□□□□□ -0.74
CPNE3-205ENST00000522240 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
CPNE3-205ENST00000522240 MDFIC2A0A1B0GVS7 189 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 A6NDX4 124 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 WRBO00258 174 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 FGF16O43320 207 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 LY86O95711 162 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 RLN2P04090 185 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 SPCS3P61009 180 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 PLGLAQ15195 96 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 CXorf66Q5JRM2 361 aaPredicted RBP10.41□□□□□ -0.74
CPNE3-205ENST00000522240 Q6YL49 198 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 IL17RELQ6ZVW7 336 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 THAP6Q8TBB0 222 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
CPNE3-205ENST00000522240 QTRT1Q9BXR0 403 aaKnown RBP10.41□□□□□ -0.74
CPNE3-205ENST00000522240 LSM5Q9Y4Y9 91 aaKnown RBP10.41□□□□□ -0.74
CPNE3-205ENST00000522240 BTBD17A6NE02 478 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 SMLR1H3BR10 107 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 SYNGR2O43760 224 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 IFNA17P01571 189 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 PVALBP20472 110 aaPredicted RBP10.4□□□□□ -0.74
CPNE3-205ENST00000522240 IER3P46695 156 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 F2RL1P55085 397 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 HSPE1P61604 102 aaKnown RBP10.4□□□□□ -0.74
CPNE3-205ENST00000522240 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
CPNE3-205ENST00000522240 PRCDQ00LT1 54 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 HNF4GQ14541 408 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 CLEC9AQ6UXN8 241 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 Q8N9W7 124 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 SSMEM1Q8WWF3 244 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 C22orf15Q8WYQ4 148 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
CPNE3-205ENST00000522240 RAB40CQ96S21 281 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 C11orf1Q9H5F2 150 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 MBD2Q9UBB5 411 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 CDC42EP3Q9UKI2 254 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.74
CPNE3-205ENST00000522240 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 E5RGE8 158 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 INS-IGF2F8WCM5 200 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 H0YIZ8 118 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 M0QZK8 103 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 SSSCA1O60232 199 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 ACTL6BO94805 426 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 NXPH3O95157 252 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 HLA-DRB1P01911 266 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 COMPP49747 757 aaPredicted RBP10.39□□□□□ -0.75
CPNE3-205ENST00000522240 TAS2R30P59541 319 aa10.39□□□□□ -0.75
CPNE3-205ENST00000522240 Q5BKY6 102 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms