RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PVRIGQ6DKI7 326 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 ZNF114Q8NC26 417 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 NECAP1Q8NC96 275 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 OR51H1Q8NH63 302 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 C7orf50Q9BRJ6 194 aaKnown RBP7.33□□□□□ -1.24
CLK4-209ENST00000521621 KLK15Q9H2R5 256 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 TMEM14BQ9NUH8 114 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 SCP2D1Q9UJQ7 156 aa7.33□□□□□ -1.24
CLK4-209ENST00000521621 NAP1L6A6NFF2 107 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 A6NHS1 94 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 CGB1A6NKQ9 187 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 S1PR2O95136 353 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 CTRB1P17538 263 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 CD33P20138 364 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 PSMB6P28072 239 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 ZNF45Q02386 682 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 ZNF616Q08AN1 781 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 ECSCRQ19T08 205 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 CTRB2Q6GPI1 263 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 OR4C16Q8NGL9 310 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 OR1N2Q8NGR9 330 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 SRRQ9GZT4 340 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 GNB4Q9HAV0 340 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 NDUFA4L2Q9NRX3 87 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 SIGLEC8Q9NYZ4 499 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 LINC01619G3V211 115 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 TNFSF12O43508 249 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 ACTL6BO94805 426 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 OR13C8Q8NGS7 320 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 TMEM56Q96MV1 263 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 CLCC1Q96S66 551 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 RTBDNQ9BSG5 229 aaPredicted RBP7.32□□□□□ -1.24
CLK4-209ENST00000521621 TMEM56-RWDD3S4R434 201 aa7.32□□□□□ -1.24
CLK4-209ENST00000521621 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 C3orf85A0A1B0GTC6 90 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C13orf42A0A1B0GVH6 325 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 CRYM-AS1A6NIL9 109 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C15orf61A6NNL5 157 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 NUDT19A8MXV4 375 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 CYB5BO43169 146 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 UBE2MP61081 183 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 SPANXN2Q5MJ10 180 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 OR4D10Q8NGI6 311 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 SLC25A21Q9BQT8 299 aaPredicted RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 RANGRFQ9HD47 186 aaPredicted RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 A0A1B0GW64 132 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 IGLC7A0M8Q6 106 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 DPPA5A6NC42 116 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 CCDC160A6NGH7 325 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 CDS2O95674 445 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 IGKV1-39P01597 117 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 TRGV3P03979 118 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 IGKV1D-39P04432 117 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 PIGPP57054 158 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C9orf66Q5T8R8 295 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 FOXB2Q5VYV0 432 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C18orf65Q6ZTR6 163 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 Q8N402 240 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 OR1L8Q8NGR8 309 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 OR52E5Q8NH55 327 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 GRPEL2Q8TAA5 225 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 LSM10Q969L4 123 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 RBMXL1Q96E39 390 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 PHB2Q99623 299 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 TMEM222Q9H0R3 208 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C14orf166Q9Y224 244 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 IGLV11-55A0A075B6I3 123 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 TEX13DA0A0J9YY54 714 aaPredicted RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 J3QRK9 145 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 TRAPPC2P0DI81 140 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 TRAPPC2BP0DI82 140 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 ZP3P21754 424 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 TPPP2P59282 170 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 GNB1P62873 340 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 DCTN2Q13561 401 aaKnown RBP7.31□□□□□ -1.24
CLK4-209ENST00000521621 VN1R17PQ8TDU5 208 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 ABHD5Q8WTS1 349 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 C5orf66Q9H5L9 145 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 NAA60Q9H7X0 242 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
CLK4-209ENST00000521621 PGAM2P15259 253 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 SRPXP78539 464 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 OR2B11Q5JQS5 317 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 OR11H1Q8NG94 326 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
CLK4-209ENST00000521621 COMMD5Q9GZQ3 224 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 HRASLSQ9HDD0 168 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 COA4Q9NYJ1 87 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 COPZ2Q9P299 210 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 PLXNB1O43157 2135 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 A0A1W2PRX2 142 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 SNAPC5O75971 98 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 PHLDA2Q53GA4 152 aa7.3□□□□□ -1.24
CLK4-209ENST00000521621 LCNL1Q6ZST4 164 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms