RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
PRKDC-204ENST00000521331 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
PRKDC-204ENST00000521331 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
PRKDC-204ENST00000521331 Q9H521 79 aa11.11□□□□□ -0.63
PRKDC-204ENST00000521331 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
PRKDC-204ENST00000521331 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
PRKDC-204ENST00000521331 S4R3C0 116 aa11.11□□□□□ -0.63
PRKDC-204ENST00000521331 TRDV1A0A1B0GX56 115 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 SCGNO76038 276 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 CLEC3BP05452 202 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 BMI1P35226 326 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 RPL5P46777 297 aaKnown RBP11.1□□□□□ -0.63
PRKDC-204ENST00000521331 ELLP55199 621 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-204ENST00000521331 BRWD1-AS2P59051 145 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 Q6ZWC4 215 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 RBM38Q9H0Z9 239 aaKnown RBP11.1□□□□□ -0.63
PRKDC-204ENST00000521331 NDUFB11Q9NX14 153 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 TAS2R8Q9NYW2 309 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
PRKDC-204ENST00000521331 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 UBE2CO00762 179 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 SPRY2O43597 315 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 MYOD1P15172 320 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-204ENST00000521331 GNG2P59768 71 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 MSMO1Q15800 293 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 ZNF585BQ52M93 769 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-204ENST00000521331 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 NUDCD2Q8WVJ2 157 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-204ENST00000521331 MRPS26Q9BYN8 205 aaKnown RBP11.09□□□□□ -0.63
PRKDC-204ENST00000521331 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 BET1LQ9NYM9 111 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 THYN1Q9P016 225 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
PRKDC-204ENST00000521331 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-204ENST00000521331 TMEM235A6NFC5 223 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 REG1AP05451 166 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 GPR183P32249 361 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 LYG2Q86SG7 212 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 SRSF8Q9BRL6 282 aaKnown RBP11.08□□□□□ -0.64
PRKDC-204ENST00000521331 HRASLSQ9HDD0 168 aa11.08□□□□□ -0.64
PRKDC-204ENST00000521331 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 NOTOA8MTQ0 251 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 CYB5BO43169 146 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKDC-204ENST00000521331 TNFAIP8O95379 198 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 PTBP1P26599 531 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKDC-204ENST00000521331 OR2B8PP59922 312 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 C22orf42Q6IC83 251 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 ZNF436Q9C0F3 470 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-204ENST00000521331 BLOC1S6Q9UL45 172 aa11.07□□□□□ -0.64
PRKDC-204ENST00000521331 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 TSPAN4O14817 238 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 SSX5O60225 188 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 FGF2P09038 288 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 TAS2R31P59538 309 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 ARPC4P59998 168 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRKDC-204ENST00000521331 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 LAMTOR1Q6IAA8 161 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 STPG3Q8N7X2 389 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 SECTM1Q8WVN6 248 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
PRKDC-204ENST00000521331 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 TGOLN2O43493 480 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 TNFSF12O43508 249 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 NQO2P16083 231 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 CATR1Q13166 79 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 LCE2DQ5TA82 110 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-204ENST00000521331 THOC7Q6I9Y2 204 aaKnown RBP11.05□□□□□ -0.64
PRKDC-204ENST00000521331 RNF183Q96D59 192 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
PRKDC-204ENST00000521331 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
PRKDC-204ENST00000521331 CCL28Q9NRJ3 127 aa11.05□□□□□ -0.64
PRKDC-204ENST00000521331 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 UPK2O00526 184 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 HPRT1P00492 218 aa11.04□□□□□ -0.64
PRKDC-204ENST00000521331 FCGR2CP31995 323 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms