RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FAM172AQ8WUF8 416 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 C20orf27Q9GZN8 174 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 CENPHQ9H3R5 247 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 ENY2Q9NPA8 101 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 ASF1BQ9NVP2 202 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 GID8Q9NWU2 228 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 OPTCQ9UBM4 332 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 R4GN34 69 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 TMEM56-RWDD3S4R434 201 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 EPG5Q9HCE0 2579 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 DHX57Q6P158 1386 aaKnown RBP2.2□□□□□ -2.06
SQLE-204ENST00000520493 DOCK5Q9H7D0 1870 aa2.2□□□□□ -2.06
SQLE-204ENST00000520493 ATG2BQ96BY7 2078 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 IGHV3-73A0A0B4J1V6 119 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 VGLL3A8MV65 326 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 OR11H12B2RN74 326 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 CPSF4O95639 269 aaKnown RBP2.19□□□□□ -2.06
SQLE-204ENST00000520493 IGLV3-19P01714 112 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 IGHV1-69P01742 117 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 SERPINE1P05121 402 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 COL8A2P25067 703 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 LPAR6P43657 344 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 TAS2R20P59543 309 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 RAB14P61106 215 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 HSPE1P61604 102 aaKnown RBP2.19□□□□□ -2.06
SQLE-204ENST00000520493 ZNF117Q03924 483 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 ZNF322Q6U7Q0 402 aaPredicted RBP2.19□□□□□ -2.06
SQLE-204ENST00000520493 SPATA12Q7Z6I5 190 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 LYPD6Q86Y78 171 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 GDPD1Q8N9F7 314 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 OR13C8Q8NGS7 320 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 OR11H2Q8NH07 326 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 MRPL30Q8TCC3 161 aaKnown RBP2.19□□□□□ -2.06
SQLE-204ENST00000520493 RPS4Y2Q8TD47 263 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 GPR119Q8TDV5 335 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 KLK6Q92876 244 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 TMEM147Q9BVK8 224 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 BOLA2Q9H3K6 86 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 XAGE1AQ9HD64 81 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 C14orf105Q9NVL8 296 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 HEY1Q9Y5J3 304 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 ZNF292O60281 2723 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 DOPEY1Q5JWR5 2465 aa2.19□□□□□ -2.06
SQLE-204ENST00000520493 HECTD1Q9ULT8 2610 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 TRPM3Q9HCF6 1732 aaPredicted RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 TRBV20OR9-2A0A075B6H5 130 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 A0A0J9YY10 115 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 LOC102725191A0A1B0GVB3 256 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 A0A1B0GX78 115 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 OR5K4A6NMS3 321 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 UBFD1O14562 309 aaKnown RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 SYNGR2O43760 224 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 CRYZL1O95825 349 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 NPYP01303 97 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 ZNF705DP0CH99 300 aaPredicted RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 BLVRBP30043 206 aaPredicted RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 TAS2R30P59541 319 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 RPS20P60866 119 aaKnown RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 HTR4Q13639 388 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 C12orf74Q32Q52 190 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 NOXRED1Q6NXP6 359 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 ZNF283Q8N7M2 679 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 CNEP1R1Q8N9A8 125 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 OR11H6Q8NGC7 330 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 CLDND2Q8NHS1 167 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 GNPDA2Q8TDQ7 276 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 LMX1AQ8TE12 382 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 NMNAT3Q96T66 252 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 WDR61Q9GZS3 305 aaKnown RBP2.18□□□□□ -2.06
SQLE-204ENST00000520493 PARVBQ9HBI1 364 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 FBXL12Q9NXK8 326 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 ROBO3Q96MS0 1386 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 PIEZO1Q92508 2521 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 RALGAPA2Q2PPJ7 1873 aa2.18□□□□□ -2.06
SQLE-204ENST00000520493 NUP160Q12769 1436 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 LCTP09848 1927 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 EXOC1LA0A1B0GW35 172 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 C17orf98A8MV24 154 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 PIRO00625 290 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 TP53I11O14683 189 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 ATG12O94817 140 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 IFNA1P01562 189 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 RBP1P09455 135 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 CD24P25063 80 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 SERPINB10P48595 397 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 RAB13P51153 203 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 FXYD7P58549 80 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 ZNF141Q15928 474 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 TRIQKQ629K1 86 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 WDR59Q6PJI9 974 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 SSX8Q7RTT4 187 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 TBC1D19Q8N5T2 526 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 ERMAPQ96PL5 475 aaPredicted RBP2.17□□□□□ -2.06
SQLE-204ENST00000520493 OR8B2Q96RD0 313 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms