RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TNCP24821 2201 aa17.08■□□□□ 0.33
VEGFA-217ENST00000518538 TRAV3A0A0B4J244 114 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 TEX22C9J3V5 150 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 I3L521 148 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 TRGV3P03979 118 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 SERPINE2P07093 398 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 OR9G9P0C7N8 305 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 CD33P20138 364 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 DEFB136Q30KP8 78 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 LINC00482Q8N8I6 264 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 GDPD1Q8N9F7 314 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 ADAD2Q8NCV1 583 aaKnown RBP17.08■□□□□ 0.32
VEGFA-217ENST00000518538 RTBDNQ9BSG5 229 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-217ENST00000518538 COA4Q9NYJ1 87 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 GPR132Q9UNW8 380 aa17.08■□□□□ 0.32
VEGFA-217ENST00000518538 C3orf85A0A1B0GTC6 90 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 E7EUB6 86 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 MRPL41Q8IXM3 137 aaKnown RBP17.07■□□□□ 0.32
VEGFA-217ENST00000518538 TTC9CQ8N5M4 171 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 DUX3Q96PT4 197 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 FYTTD1Q96QD9 318 aaKnown RBP17.07■□□□□ 0.32
VEGFA-217ENST00000518538 TP53RKQ96S44 253 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 C5orf66Q9H5L9 145 aa17.07■□□□□ 0.32
VEGFA-217ENST00000518538 A0A1B0GW64 132 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 HMX3A6NHT5 357 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 B3GALNT1O75752 331 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 IGKV1-39P01597 117 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 IGKV1D-39P04432 117 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 MYOD1P15172 320 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 OR2B8PP59922 312 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 SLC25A42Q86VD7 318 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 SEC22AQ96IW7 307 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 SCGB3A2Q96PL1 93 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 OR5B12Q96R08 314 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 COMMD5Q9GZQ3 224 aa17.06■□□□□ 0.32
VEGFA-217ENST00000518538 LGALS1P09382 135 aaKnown RBP17.05■□□□□ 0.32
VEGFA-217ENST00000518538 ZNF45Q02386 682 aa17.05■□□□□ 0.32
VEGFA-217ENST00000518538 TSC22D3Q99576 134 aa17.05■□□□□ 0.32
VEGFA-217ENST00000518538 ZNF257Q9Y2Q1 563 aa17.05■□□□□ 0.32
VEGFA-217ENST00000518538 A0A0G2JLM5 398 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 CGB1A6NKQ9 187 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 NPIPB5A8MRT5 1133 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 SNAPC5O75971 98 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 FHL3Q13643 280 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 BAK1Q16611 211 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 CNPY1Q3B7I2 92 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 ZNF57Q68EA5 555 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-217ENST00000518538 OR11H1Q8NG94 326 aa17.04■□□□□ 0.32
VEGFA-217ENST00000518538 SDHCQ99643 169 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-217ENST00000518538 NBEAL1Q6ZS30 2694 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 TEX13DA0A0J9YY54 714 aaPredicted RBP17.03■□□□□ 0.32
VEGFA-217ENST00000518538 UCP1P25874 307 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 SP6Q3SY56 376 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 SAMD5Q5TGI4 173 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 TRIQKQ629K1 86 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 THOC7Q6I9Y2 204 aaKnown RBP17.03■□□□□ 0.32
VEGFA-217ENST00000518538 H2BFWTQ7Z2G1 175 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 OR1N2Q8NGR9 330 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 RCC1LQ96I51 464 aaKnown RBP17.03■□□□□ 0.32
VEGFA-217ENST00000518538 SRSF8Q9BRL6 282 aaKnown RBP17.03■□□□□ 0.32
VEGFA-217ENST00000518538 QTRT1Q9BXR0 403 aaKnown RBP17.03■□□□□ 0.32
VEGFA-217ENST00000518538 NAA60Q9H7X0 242 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 PRNDQ9UKY0 176 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 NSG2Q9Y328 171 aa17.03■□□□□ 0.32
VEGFA-217ENST00000518538 C13orf42A0A1B0GVH6 325 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 CRYM-AS1A6NIL9 109 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 G3V4G9 280 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 ATG12O94817 140 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 IGHV3-11P01762 117 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 OR5AC1P0C628 307 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 AREGP15514 252 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 INPP1P49441 399 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 ZNF616Q08AN1 781 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 TRIM16LQ309B1 348 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 LINC00299Q6ZSB3 139 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 USMG5Q96IX5 58 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 ALX4Q9H161 411 aaPredicted RBP17.02■□□□□ 0.32
VEGFA-217ENST00000518538 FKBP11Q9NYL4 201 aa17.02■□□□□ 0.32
VEGFA-217ENST00000518538 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 TEX50A0A1B0GTY4 177 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 FAM223BA6NKX1 122 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 C15orf61A6NNL5 157 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 DUS4LO95620 317 aaKnown RBP17.01■□□□□ 0.31
VEGFA-217ENST00000518538 PRH1P02810 166 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 CRYGCP07315 174 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 OR8U8P0C7N1 319 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 PSMB6P28072 239 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 FAM223AQ8IWN6 122 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 OR1L8Q8NGR8 309 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 TMEM222Q9H0R3 208 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 BATF3Q9NR55 127 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 TMEM14BQ9NUH8 114 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 OR51B2Q9Y5P1 312 aa17.01■□□□□ 0.31
VEGFA-217ENST00000518538 IGLC7A0M8Q6 106 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 TRAPPC2P0DI81 140 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 TRAPPC2BP0DI82 140 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 IGLL1P15814 213 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 CTRB1P17538 263 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 AKR1C2P52895 323 aa17■□□□□ 0.31
VEGFA-217ENST00000518538 RAB25P57735 213 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms