RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TUBGCP3Q96CW5 907 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 SCGB3A2Q96PL1 93 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 DSCR8Q96T75 97 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 MS4A12Q9NXJ0 267 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 IFNKQ9P0W0 207 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 HMG20BQ9P0W2 317 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 CKLFQ9UBR5 152 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 U3KQV3 271 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 TRANK1O15050 2925 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 KIDINS220Q9ULH0 1771 aa-3.18□□□□□ -2.92
SNORA40.16-201ENST00000517238 CASKIN1Q8WXD9 1431 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 A0A0B4J2E0 115 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 AIM2O14862 343 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 FGF16O43320 207 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 STK16O75716 305 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 ANXA5P08758 320 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 FAM228BP0C875 321 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 ZNF24P17028 368 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 HLA-DPA1P20036 260 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 PYCR1P32322 319 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 BATFQ16520 125 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 LUZP2Q86TE4 346 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 VKORC1L1Q8N0U8 176 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 OR4E2Q8NGC2 313 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 PIH1D2Q8WWB5 315 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 CAPSLQ8WWF8 208 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 RPRD1AQ96P16 312 aaPredicted RBP-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 TP53RKQ96S44 253 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 BBS2Q9BXC9 721 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 SHCBP1LQ9BZQ2 653 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 GTSF1LQ9H1H1 148 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 OR51M1Q9H341 326 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 DDIT4Q9NX09 232 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 OR51B2Q9Y5P1 312 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 SIPA1L2Q9P2F8 1722 aaPredicted RBP-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 DNAH8Q96JB1 4490 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 KDM6AO15550 1401 aaPredicted RBP-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 TNS3Q68CZ2 1445 aa-3.19□□□□□ -2.92
SNORA40.16-201ENST00000517238 SIPA1L3O60292 1781 aaPredicted RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 GVQW2A0A096LPI5 108 aaPredicted RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 IGHV2OR16-5A0A0B4J2B6 119 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 SMCO2A6NFE2 343 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 APOC4-APOC2K7ER74 178 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 NDUFS8O00217 210 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 GIMD1P0DJR0 217 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 MT1GP13640 62 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 ORM2P19652 201 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 SLC1A1P43005 524 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 HAAOP46952 286 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 GMFBP60983 142 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 DCDP81605 110 aaKnown RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 KLKP1Q107X0 134 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 MFSD4BQ5TF39 518 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 MICU2Q8IYU8 434 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 MT1MQ8N339 61 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 TMEM254Q8TBM7 123 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 RNASE6Q93091 150 aaKnown RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 ABHD14BQ96IU4 210 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 CYTH2Q99418 400 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 SLC7A5P2Q9GIP4 190 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 NSRP1Q9H0G5 558 aaKnown RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 RSL24D1Q9UHA3 163 aaKnown RBP-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 NCOA1Q15788 1441 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 FMN1Q68DA7 1419 aa-3.2□□□□□ -2.92
SNORA40.16-201ENST00000517238 BOD1L1Q8NFC6 3051 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 TRAV3A0A0B4J244 114 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 H0YGG7 62 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 PTTG1O95997 202 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 APODP05090 189 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 RPS3P23396 243 aaKnown RBP eCLIP-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 SFNP31947 248 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 ARR3P36575 388 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 ACTR1BP42025 376 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 OR1E2P47887 323 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 CD151P48509 253 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 CCT3P49368 545 aaKnown RBP-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 TBPL1P62380 186 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 HLA-DRB3P79483 266 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 FXYD3Q14802 87 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 GLRA4Q5JXX5 417 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 ZNF833PQ6ZTB9 187 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 CLVS1Q8IUQ0 354 aaPredicted RBP-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 OFCC1Q8IZS5 231 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 TEX47Q8TBZ9 253 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 NT5CQ8TCD5 201 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 ZNF431Q8TF32 576 aaPredicted RBP-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 BIRC8Q96P09 236 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 GAL3ST2Q9H3Q3 398 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 BEX1Q9HBH7 125 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 SPCS1Q9Y6A9 102 aa-3.21□□□□□ -2.92
SNORA40.16-201ENST00000517238 ADGRG4Q8IZF6 3080 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 ABCC12Q96J65 1359 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 A0A1B0GXF2 115 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 A6NN06 94 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 MAPK13O15264 365 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 KRT7P08729 469 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 PDE6GP18545 87 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 RPS4Y1P22090 263 aaKnown RBP-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 HLA-DMBP28068 263 aa-3.22□□□□□ -2.92
SNORA40.16-201ENST00000517238 PPT1P50897 306 aa-3.22□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms