RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 CXorf66Q5JRM2 361 aaPredicted RBP9.33□□□□□ -0.92
SNF8-215ENST00000515572 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 C11orf44Q8N8P7 122 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 IL22RA2Q969J5 263 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
SNF8-215ENST00000515572 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 ZFP57Q9NU63 452 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 FKBP11Q9NYL4 201 aa9.33□□□□□ -0.92
SNF8-215ENST00000515572 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
SNF8-215ENST00000515572 H3BUA1 57 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 PSMB8P28062 276 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 SLC6A1P30531 599 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 AKR1C2P52895 323 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
SNF8-215ENST00000515572 C2orf68Q2NKX9 166 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 THOC7Q6I9Y2 204 aaKnown RBP9.32□□□□□ -0.92
SNF8-215ENST00000515572 TMEM65Q6PI78 240 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 SLC25A42Q86VD7 318 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 ZNF695Q8IW36 515 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 RBPMSQ93062 196 aaKnown RBP9.32□□□□□ -0.92
SNF8-215ENST00000515572 RRNAD1Q96FB5 475 aaKnown RBP9.32□□□□□ -0.92
SNF8-215ENST00000515572 TMEM56Q96MV1 263 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 SRSF8Q9BRL6 282 aaKnown RBP9.32□□□□□ -0.92
SNF8-215ENST00000515572 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 TMEM56-RWDD3S4R434 201 aa9.32□□□□□ -0.92
SNF8-215ENST00000515572 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 BRI3O95415 125 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 IGKV1-5P01602 117 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 PF4V1P10720 104 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 VAMP1P23763 118 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 OR2B8PP59922 312 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 TMEM187Q14656 261 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 TMEM268Q5VZI3 342 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
SNF8-215ENST00000515572 LGI3Q8N145 548 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 OR4A16Q8NH70 328 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 RNASE11Q8TAA1 199 aaKnown RBP9.31□□□□□ -0.92
SNF8-215ENST00000515572 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
SNF8-215ENST00000515572 SLA2Q9H6Q3 261 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 TBC1D24Q9ULP9 559 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
SNF8-215ENST00000515572 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 TEX22C9J3V5 150 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 SOX15O60248 233 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 SFT2D2O95562 160 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 TCRBP04435 133 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 RPLP1P05386 114 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 P0C879 139 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 DEFA1P59665 94 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 DEFA3P59666 94 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 RPL23AP62750 156 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 ZNF429Q86V71 674 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 SELENOHQ8IZQ5 122 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 LHFPL5Q8TAF8 219 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 LSM10Q969L4 123 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 QTRT1Q9BXR0 403 aaKnown RBP9.3□□□□□ -0.92
SNF8-215ENST00000515572 C20orf85Q9H1P6 137 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 OR51B2Q9Y5P1 312 aa9.3□□□□□ -0.92
SNF8-215ENST00000515572 A0A0B4J2A0 478 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 TEX50A0A1B0GTY4 177 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 DUXBA0A1W2PPF3 345 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 RBMXL2O75526 392 aaKnown RBP9.29□□□□□ -0.92
SNF8-215ENST00000515572 DHFRP00374 187 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 HLA-AP01891 365 aaKnown RBP9.29□□□□□ -0.92
SNF8-215ENST00000515572 TRAPPC2P0DI81 140 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 TRAPPC2BP0DI82 140 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
SNF8-215ENST00000515572 RAB9AP51151 201 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 RAB25P57735 213 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 IFITM3Q01628 133 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 PPP1R1AQ13522 171 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 OR4F17Q8NGA8 305 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 ALX4Q9H161 411 aaPredicted RBP9.29□□□□□ -0.92
SNF8-215ENST00000515572 COA4Q9NYJ1 87 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 CACFD1Q9UGQ2 172 aa9.29□□□□□ -0.92
SNF8-215ENST00000515572 SHPKQ9UHJ6 478 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms