RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 PPP1R1AQ13522 171 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 PLEKHG7Q6ZR37 379 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 TMEM251Q8N6I4 163 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 OR8B3Q8NGG8 313 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 ODF3Q96PU9 254 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 UPF3BQ9BZI7 483 aaKnown RBP0.56□□□□□ -2.32
CXXC4-203ENST00000515509 OR8D2Q9GZM6 311 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 PLEKHJ1Q9NW61 149 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 AK3Q9UIJ7 227 aa0.56□□□□□ -2.32
CXXC4-203ENST00000515509 SETD5Q9C0A6 1442 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 BAZ2BQ9UIF8 2168 aaKnown RBP0.55□□□□□ -2.32
CXXC4-203ENST00000515509 IGKV2D-26A0A0A0MRZ7 120 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 TRBV10-2A0A0K0K1G8 114 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 OR4C45A6NMZ5 311 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 GOLGA8KD6RF30 607 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 GOLGA8MH3BSY2 632 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 HLA-DMBP28068 263 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 HAAOP46952 286 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 CSN1S1P47710 185 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 RAB13P51153 203 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 POLR2GP62487 172 aaKnown RBP eCLIP0.55□□□□□ -2.32
CXXC4-203ENST00000515509 SKP1P63208 163 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 TMED1Q13445 227 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 C10orf55Q5SWW7 151 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 CST9Q5W186 159 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 DHFR2Q86XF0 187 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 TBC1D19Q8N5T2 526 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 ZNF439Q8NDP4 499 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 OR1M1Q8NGA1 313 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 ANKRD7Q92527 254 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 RSL24D1Q9UHA3 163 aaKnown RBP0.55□□□□□ -2.32
CXXC4-203ENST00000515509 PXMP4Q9Y6I8 212 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 FREM1Q5H8C1 2179 aa0.55□□□□□ -2.32
CXXC4-203ENST00000515509 GREB1Q4ZG55 1949 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 PCDH15Q96QU1 1955 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 MYOFQ9NZM1 2061 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 DISC1C4P0D8 188 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 I3L521 148 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 TYMSP04818 313 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 SULT1A3P0DMM9 295 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 SULT1A4P0DMN0 295 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 DEFB115Q30KQ5 88 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 HIST2H3AQ71DI3 136 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 ZNF676Q8N7Q3 588 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 CMTM5Q96DZ9 223 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 REG4Q9BYZ8 158 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 MAP1LC3AQ9H492 121 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 C15orf41Q9Y2V0 281 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 C22orf24Q9Y442 160 aa0.54□□□□□ -2.32
CXXC4-203ENST00000515509 STRCQ7RTU9 1775 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 SDCBPO00560 298 aaPredicted RBP0.53□□□□□ -2.32
CXXC4-203ENST00000515509 ITGB1BP1O14713 200 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 SSNA1O43805 119 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 IGHV3-7P01780 117 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 KRT7P08729 469 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 C8orf88P0DMB2 117 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 RNASE3P12724 160 aaKnown RBP0.53□□□□□ -2.32
CXXC4-203ENST00000515509 S100A7P31151 101 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 OR4D2P58180 307 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 MED21Q13503 144 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 RSU1Q15404 277 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 NDUFA5Q16718 116 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.53□□□□□ -2.32
CXXC4-203ENST00000515509 ZNF550Q7Z398 422 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 SLC51BQ86UW2 128 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 COMMD7Q86VX2 200 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 OR5B17Q8NGF7 314 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 ERMAPQ96PL5 475 aaPredicted RBP0.53□□□□□ -2.32
CXXC4-203ENST00000515509 OR51I2Q9H344 312 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 FKBP14Q9NWM8 211 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 PAQR5Q9NXK6 330 aaPredicted RBP0.53□□□□□ -2.32
CXXC4-203ENST00000515509 BAIAP2Q9UQB8 552 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 FUT9Q9Y231 359 aa0.53□□□□□ -2.32
CXXC4-203ENST00000515509 BRWD1Q9NSI6 2320 aa0.53□□□□□ -2.33
CXXC4-203ENST00000515509 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
CXXC4-203ENST00000515509 LINC00854A0A1B0GVQ3 168 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 IRGMA1A4Y4 181 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 PFDN6O15212 129 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 SLC22A1O15245 554 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 C1QAP02745 245 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 SRP19P09132 144 aaKnown RBP0.52□□□□□ -2.33
CXXC4-203ENST00000515509 FAM228BP0C875 321 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 COX5BP10606 129 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 FGF6P10767 208 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 RPL12P30050 165 aaKnown RBP0.52□□□□□ -2.33
CXXC4-203ENST00000515509 MAP2K4P45985 399 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 REG1BP48304 166 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 FXYD2P54710 66 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 FABP9Q0Z7S8 132 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 MLLT11Q13015 90 aaPredicted RBP0.52□□□□□ -2.33
CXXC4-203ENST00000515509 ZNF345Q14585 488 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 TMEM156Q8N614 296 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 ROPN1LQ96C74 230 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 ROS1P08922 2347 aa0.52□□□□□ -2.33
CXXC4-203ENST00000515509 C1orf232A0A0U1RR37 186 aa0.51□□□□□ -2.33
CXXC4-203ENST00000515509 GGT3PA6NGU5 568 aa0.51□□□□□ -2.33
CXXC4-203ENST00000515509 TMEM212A6NML5 194 aa0.51□□□□□ -2.33
CXXC4-203ENST00000515509 PMP2P02689 132 aa0.51□□□□□ -2.33
CXXC4-203ENST00000515509 CLPSP04118 112 aa0.51□□□□□ -2.33
CXXC4-203ENST00000515509 METTL15P1P0C7V9 234 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms