RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NAT8Q9UHE5 227 aa1.49□□□□□ -2.17
HMGCS1-207ENST00000514610 FLT4P35916 1363 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 MYOFQ9NZM1 2061 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 IGHV1-69-2A0A0G2JMI3 117 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 DISC1C4P0D8 188 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 CREBL2O60519 120 aaPredicted RBP1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 PPBPP02775 128 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 SERPINA7P05543 415 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 LYNX1P0DP58 116 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 NAA20P61599 178 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 COQ5Q5HYK3 327 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 CLVS2Q5SYC1 327 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 SLC36A1Q7Z2H8 476 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 GID4Q8IVV7 300 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 OR51D1Q8NGF3 324 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 NOSIPQ9Y314 301 aaKnown RBP1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 LAMB2P55268 1798 aa1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 BAZ2BQ9UIF8 2168 aaKnown RBP1.48□□□□□ -2.17
HMGCS1-207ENST00000514610 KIF13BQ9NQT8 1826 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 TRAPPC2LH3BP13 241 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 I3L521 148 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 LEPROTO15243 131 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 RAB13P51153 203 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 EMP1P54849 157 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 TCL1AP56279 114 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 EMX1Q04741 257 aaPredicted RBP1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 IQCF2Q8IXL9 164 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 DYNAPQ8N1N2 210 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 TBC1D19Q8N5T2 526 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 ACOT12Q8WYK0 555 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 OR8D2Q9GZM6 311 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 AK3Q9UIJ7 227 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 TIMM22Q9Y584 194 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 MAP3K5Q99683 1374 aa1.47□□□□□ -2.17
HMGCS1-207ENST00000514610 TRBV6-5A0A0K0K1A5 114 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 ACOX3O15254 700 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 TGOLN2O43493 480 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 CALB1P05937 261 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 UCHL3P15374 230 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 FABP9Q0Z7S8 132 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 BATFQ16520 125 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 MOGQ16653 247 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 C10orf67Q8IYJ2 551 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 RPP25LQ8N5L8 163 aaKnown RBP1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 C9orf163Q8N9P6 203 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 PTH2Q96A98 100 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 CHST6Q9GZX3 395 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 XAGE1AQ9HD64 81 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 C9orf84Q5VXU9 1444 aa1.46□□□□□ -2.18
HMGCS1-207ENST00000514610 SNAPC4Q5SXM2 1469 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 SCAF11Q99590 1463 aaKnown RBP1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 KMT2BQ9UMN6 2715 aaPredicted RBP1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 MSNP26038 577 aaKnown RBP1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 HAAOP46952 286 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 CSN1S1P47710 185 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 MARCKSL1P49006 195 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 EVX1P49640 407 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 SFXN4Q6P4A7 337 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 DEFB125Q8N687 156 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 OR1M1Q8NGA1 313 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 GPR32P1Q8NGA4 272 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 OR5B17Q8NGF7 314 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 RNF133Q8WVZ7 376 aa1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 PAQR5Q9NXK6 330 aaPredicted RBP1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 INTS1Q8N201 2190 aaKnown RBP1.45□□□□□ -2.18
HMGCS1-207ENST00000514610 OR51F1A6NGY5 319 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 IFNA5P01569 189 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 TNNC2P02585 160 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 ANGP03950 147 aaKnown RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 ISG15P05161 165 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 KRT7P08729 469 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 HLA-DMBP28068 263 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 S100A7P31151 101 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 AKR1C3P42330 323 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 OR4D2P58180 307 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 POLR2GP62487 172 aaKnown RBP eCLIP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 HIST1H4AP62805 103 aaKnown RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 NNATQ16517 81 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 Q1T7F1 81 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 FAM27BQ5VT28 67 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 C8orf74Q6P047 294 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 FP248Q71RG6 208 aaPredicted RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 MED12LQ86YW9 2145 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 PARD6GQ9BYG4 376 aaPredicted RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 MRPS26Q9BYN8 205 aaKnown RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 FAM96AQ9H5X1 160 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 GUCA1BQ9UMX6 200 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 STRCQ7RTU9 1775 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 MICAL3Q7RTP6 2002 aa1.44□□□□□ -2.18
HMGCS1-207ENST00000514610 INMT-MINDY4F8WBC2 141 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 CRPP02741 224 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 FAM228BP0C875 321 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 NKX2-5P52952 324 aaPredicted RBP1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 MAGOHP61326 146 aaKnown RBP1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 ARHGAP11BQ3KRB8 267 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 C9orf64Q5T6V5 341 aa1.43□□□□□ -2.18
HMGCS1-207ENST00000514610 FAM173BQ6P4H8 233 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms