RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ROS1P08922 2347 aa2.92□□□□□ -1.94
RFC1-216ENST00000514572 NOTCH1P46531 2555 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 IGHV3-21A0A0B4J1V1 117 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 TRAV17A0A0B4J275 112 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 E7EQ34 232 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 F5H768 121 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 MFNGO00587 321 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 BIRC5O15392 142 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 POP7O75817 140 aaKnown RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 KCNK2O95069 426 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 SOX14O95416 240 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 ATP6V1G2O95670 118 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 NRASP01111 189 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 HRASP01112 189 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 KRASP01116 189 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 PTHLHP12272 177 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 UCHL3P15374 230 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 MAGEA2P43356 314 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 CBX5P45973 191 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 SPINT3P49223 89 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 NUDT2P50583 147 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 ZNF83P51522 516 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 RAB25P57735 213 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 DCDP81605 110 aaKnown RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 SKP2Q13309 424 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 ENDOGQ14249 297 aaKnown RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 HLA-DRB5Q30154 266 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 TTMPQ5BVD1 217 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 HENMT1Q5T8I9 393 aaKnown RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 WDR59Q6PJI9 974 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 OLIG3Q7RTU3 272 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 TRAPPC5Q8IUR0 188 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 CPNE9Q8IYJ1 553 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 H1FOOQ8IZA3 346 aaPredicted RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 ZFP82Q8N141 532 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 JOSD2Q8TAC2 188 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 MAL2Q969L2 176 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 YIPF5Q969M3 257 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 SMIM12Q96EX1 92 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 MCEEQ96PE7 176 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 LYSMD1Q96S90 227 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 C1orf50Q9BV19 199 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 SLC22A4Q9H015 551 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 DRC3Q9H069 523 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 NSRP1Q9H0G5 558 aaKnown RBP2.91□□□□□ -1.94
RFC1-216ENST00000514572 ZNF586Q9NXT0 402 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 UBAP1Q9NZ09 502 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 HEATR5BQ9P2D3 2071 aa2.91□□□□□ -1.94
RFC1-216ENST00000514572 ZNF98A6NK75 572 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 KLF7O75840 302 aaPredicted RBP2.9□□□□□ -1.95
RFC1-216ENST00000514572 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
RFC1-216ENST00000514572 UQCRHP07919 91 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 C8orf88P0DMB2 117 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 AZU1P20160 251 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 RCVRNP35243 200 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 CA7P43166 264 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 INPP1P49441 399 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 HMGN2P46Q86SG4 172 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 PHF13Q86YI8 300 aaPredicted RBP2.9□□□□□ -1.95
RFC1-216ENST00000514572 PPCDCQ96CD2 204 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 REEP6Q96HR9 211 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 LINC00477Q96M19 166 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 B9D2Q9BPU9 175 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 SHANK2-AS3Q9BTD1 123 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 UBQLN4Q9NRR5 601 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 PARVAQ9NVD7 372 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 PKD1L1Q8TDX9 2849 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 ABCA1O95477 2261 aa2.9□□□□□ -1.95
RFC1-216ENST00000514572 DAPL1A0PJW8 107 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 C2orf74A8MZ97 194 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 F5H5P2 479 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 AZIN1O14977 448 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 RGS5O15539 181 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 OR2B3O76000 313 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 AHSA1O95433 338 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 IGKV3-11P04433 115 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 UGT2B7P16662 529 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 CA5AP35218 305 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 TGFBR2P37173 567 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 PMELP40967 661 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 RAB2AP61019 212 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 MAXP61244 160 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 MMDQ15546 238 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 DNAL1Q4LDG9 190 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 KRTAP13-2Q52LG2 175 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 CENPWQ5EE01 88 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 TMEM69Q5SWH9 247 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 DNLZQ5SXM8 178 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 KHDRBS2Q5VWX1 349 aaKnown RBP2.89□□□□□ -1.95
RFC1-216ENST00000514572 LAIR2Q6ISS4 152 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 TTC33Q6PID6 262 aaPredicted RBP2.89□□□□□ -1.95
RFC1-216ENST00000514572 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 CPAMD8Q8IZJ3 1885 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 LCN9Q8WX39 176 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 DEDD2Q8WXF8 326 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 TAMM41Q96BW9 452 aa2.89□□□□□ -1.95
RFC1-216ENST00000514572 SNRNP25Q9BV90 132 aaKnown RBP2.89□□□□□ -1.95
RFC1-216ENST00000514572 PARD6GQ9BYG4 376 aaPredicted RBP2.89□□□□□ -1.95
RFC1-216ENST00000514572 PLA2G12AQ9BZM1 189 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms