RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MED12LQ86YW9 2145 aa6.12□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF20P17024 532 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 LGALS4P56470 323 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 TMEM177Q53S58 311 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 ARSJQ5FYB0 599 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 FAM57BQ71RH2 274 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 OSR2Q8N2R0 312 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 PNKDQ8N490 385 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 FGFBP3Q8TAT2 258 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 TMEM204Q9BSN7 226 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 EMC6Q9BV81 110 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 MANBALQ9NQG1 85 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 SLC25A15Q9Y619 301 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 ZGRF1Q86YA3 2104 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 IGHV3-15A0A0B4J1V0 119 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 A6NNC1 897 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 IGLV1-44P01699 117 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 FGF8P55075 233 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 PLP2Q04941 152 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 IQCJQ1A5X6 159 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 C5orf64Q2M2E5 130 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 CR1LQ2VPA4 569 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 RPRMLQ8N4K4 120 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 NUP37Q8NFH4 326 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 PIGLQ9Y2B2 252 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 TRAV24A0A0B4J272 114 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 PSMB11A5LHX3 300 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 NKX6-3A6NJ46 265 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 CCL25O15444 150 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 OR10J1P30954 320 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 CNN1P51911 297 aaKnown RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 ARF6P62330 175 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 MBNL2Q5VZF2 373 aaKnown RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 MYPOPQ86VE0 399 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 GJC3Q8NFK1 279 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 TAF15Q92804 592 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLIP1-205ENST00000514271 URB1-AS1Q96HZ7 61 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 POM121L2Q96KW2 1035 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
CLIP1-205ENST00000514271 A0A1B0GUS0 222 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CLDN1O95832 211 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CD3EP07766 207 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 OR3A1P47881 315 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 MFAP4P55083 255 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 RPL23AP62750 156 aaKnown RBP6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CCDC71LQ8N9Z2 235 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 OR5L1Q8NGL2 311 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 OR1L1Q8NH94 360 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 PINX1Q96BK5 328 aaKnown RBP6.1□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF442Q9H7R0 627 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 TANC2Q9HCD6 1990 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 C9JCJ5 164 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 H0YJW9 148 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 SSSCA1O60232 199 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF205O95201 554 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 IGKV3-15P01624 115 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 HLA-DQA2P01906 255 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 SCTP09683 121 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 ADMP35318 185 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 ERVS71-1P61550 626 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 HERV-K104P63124 156 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CEACAM16Q2WEN9 425 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 FAM90A1Q86YD7 464 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CMTM1Q8IZ96 169 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 LRRC75A-AS1Q8N1F1 130 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 GATAD1Q8WUU5 269 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 SDSLQ96GA7 329 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 IGF2BP2-AS1Q96M15 143 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 PKIBQ9C010 78 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 CBLN4Q9NTU7 201 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 SMPXQ9UHP9 88 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 V9GYV3 84 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF407Q9C0G0 2248 aa6.1□□□□□ -1.43
CLIP1-205ENST00000514271 F6UZH7 168 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 FUT6P51993 359 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 KLF5Q13887 457 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF497Q6ZNH5 498 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 OR4P4Q8NGL7 312 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 BEX4Q9NWD9 120 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-205ENST00000514271 DNAJC13O75165 2243 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 IGHV2-70DA0A0C4DH43 119 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF503-AS2A6NEH8 195 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 FAM90A9PA6NNJ1 464 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 CDIPTO14735 213 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 PHF1O43189 567 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-205ENST00000514271 RPLP1P05386 114 aaKnown RBP6.09□□□□□ -1.43
CLIP1-205ENST00000514271 BSXQ3C1V8 233 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 CT83Q5H943 113 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 SPATA12Q7Z6I5 190 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 GATD1Q8NB37 220 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 YAE1D1Q9NRH1 226 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 FBXL7Q9UJT9 491 aa6.09□□□□□ -1.43
CLIP1-205ENST00000514271 GALR1P47211 349 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 TIRAPP58753 221 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF787Q6DD87 383 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 PVRIGQ6DKI7 326 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 TMEM116Q8NCL8 245 aa6.09□□□□□ -1.44
CLIP1-205ENST00000514271 RDH5Q92781 318 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms