RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 LINC00854A0A1B0GVQ3 168 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 G3V318 75 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 H0Y980 276 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 ARPC1BO15143 372 aaKnown RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 SERPINE2P07093 398 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 SSBP2P81877 361 aaPredicted RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 CFHR3Q02985 330 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 DCTN2Q13561 401 aaKnown RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 POU2AF1Q16633 256 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 MRGPRG-AS1Q2M3A8 158 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 KHDC1LQ5JSQ8 128 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 OR4A47Q6IF82 309 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 MMD2Q8IY49 270 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 TMEM167AQ8TBQ9 72 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 SCGB3A2Q96PL1 93 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 RCHY1Q96PM5 261 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 RTBDNQ9BSG5 229 aaPredicted RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 FAM103A1Q9BTL3 118 aaKnown RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 CCDC32Q9BV29 185 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 C5orf66Q9H5L9 145 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 ZNF430Q9H8G1 570 aaPredicted RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 FAM212BQ9NTI7 297 aaPredicted RBP6.78□□□□□ -1.32
CAST-240ENST00000514055 TMEM140Q9NV12 185 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 BET1LQ9NYM9 111 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 GPR132Q9UNW8 380 aa6.78□□□□□ -1.32
CAST-240ENST00000514055 TNCP24821 2201 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 TEX13DA0A0J9YY54 714 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 A0A1W2PN81 502 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 NAP1L6A6NFF2 107 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 MARCH11A6NNE9 402 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 CENPXA8MT69 81 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 KRASP01116 189 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 IGHG4P01861 327 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 EGR2P11161 476 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 RPA2P15927 270 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 G6PCP35575 357 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 CHRNA7P36544 502 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 TMEM267Q0VDI3 215 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 FOXE3Q13461 319 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 ZNF846Q147U1 533 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 C19orf54Q5BKX5 351 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 CXorf66Q5JRM2 361 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 C10orf55Q5SWW7 151 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 TEX38Q6PEX7 206 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 UNQ5815/PRO19632Q6UWF5 114 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 C18orf65Q6ZTR6 163 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 OR4A5Q8NH83 315 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 SRSF12Q8WXF0 261 aaKnown RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 TP53RKQ96S44 253 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 PHB2Q99623 299 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 WDR12Q9GZL7 423 aaKnown RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 NAA60Q9H7X0 242 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 FOXA2Q9Y261 457 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 VSIG4Q9Y279 399 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 TSSC4Q9Y5U2 329 aaPredicted RBP6.77□□□□□ -1.33
CAST-240ENST00000514055 NUBP2Q9Y5Y2 271 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
CAST-240ENST00000514055 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 CRYM-AS1A6NIL9 109 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 UPK2O00526 184 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 B3GALNT1O75752 331 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 ELANEP08246 267 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 OR5AC1P0C628 307 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 HLA-GP17693 338 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 CD40LGP29965 261 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 PPIFP30405 207 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 MAS1LP35410 378 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 RPL8P62917 257 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 RBMS2Q15434 407 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 TRIM16LQ309B1 348 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 SP6Q3SY56 376 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 AKIRIN2Q53H80 203 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 TMED4Q7Z7H5 227 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 SGPP2Q8IWX5 399 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 MINDY2Q8NBR6 621 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 ADAD2Q8NCV1 583 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 OR5M8Q8NGP6 311 aa6.76□□□□□ -1.33
CAST-240ENST00000514055 SLC25A21Q9BQT8 299 aaPredicted RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 C7orf50Q9BRJ6 194 aaKnown RBP6.76□□□□□ -1.33
CAST-240ENST00000514055 TRAV3A0A0B4J244 114 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 SOX15O60248 233 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 SNAPC5O75971 98 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 ATG12O94817 140 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 IGKV1-39P01597 117 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 IGLV1-40P01703 118 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 IGKV1D-39P04432 117 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 RPLP1P05386 114 aaKnown RBP6.75□□□□□ -1.33
CAST-240ENST00000514055 IL6RP08887 468 aaPredicted RBP6.75□□□□□ -1.33
CAST-240ENST00000514055 APELAP0DMC3 54 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 AKR1C4P17516 323 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 UCP1P25874 307 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 PSMB8P28062 276 aa6.75□□□□□ -1.33
CAST-240ENST00000514055 BTCP35070 178 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms