RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RAB1CQ92928 201 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 NPVFQ9HCQ7 196 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 TMEM265A0A087WTH1 108 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 CGAP01215 116 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 IGKV3-15P01624 115 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 CD59P13987 128 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 CD99P14209 185 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 GATA2P23769 480 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 IER3P46695 156 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 TOMM20LQ6UXN7 152 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 TPRP12270 2363 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 F2Z2F3 143 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 NKX2-8O15522 239 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 HTD2P86397 168 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 EFNB3Q15768 340 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 MSMPQ1L6U9 139 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 PRO3102Q9H379 93 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 CLCF1Q9UBD9 225 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 K7EN84 100 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 MPDU1O75352 247 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 TNFSF10P50591 281 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 KRTCAP3Q53RY4 240 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 STPG3Q8N7X2 389 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 ZFHX4Q86UP3 3567 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 AHRRA9YTQ3 701 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 CRISP2P16562 243 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 IGFBP2P18065 325 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 BAGE3Q86Y29 109 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 BAGE2Q86Y30 109 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 OPN3Q9H1Y3 402 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 FCN1O00602 326 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 SPRY3O43610 288 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 SERF1AO75920 110 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 NPY1RP25929 384 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 ERVFC1-1P60608 527 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 TRIP6Q15654 476 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 MIR17HGQ75NE6 70 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 MOGAT3Q86VF5 341 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 GCSAMQ8N6F7 178 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 FAM216AQ8WUB2 273 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 HSPB9Q9BQS6 159 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 IFI27L2Q9H2X8 130 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 TP53TG3Q9ULZ0 132 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 COLQQ9Y215 455 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 CA2P00918 260 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 CASP6P55212 293 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 TCL1AP56279 114 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 RAB4BP61018 213 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 NUTF2P61970 127 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 MLANAQ16655 118 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 LBHQ53QV2 105 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 DUX4L9Q6RFH8 374 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 TEPPQ6URK8 271 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 LYG1Q8N1E2 194 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 GCM1Q9NP62 436 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 CFAP47Q6ZTR5 3102 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 IGHV2OR16-5A0A0B4J2B6 119 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 PRSS46E5RG02 174 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 ZNF83P51522 516 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 ZNF124Q15973 351 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 ASPHD1Q5U4P2 390 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 CYB5R2Q6BCY4 276 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 OR8I2Q8N0Y5 310 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 FDCSPQ8NFU4 85 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 LRFN3Q9BTN0 628 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
LIMCH1-215ENST00000512632 IGHV1-18A0A0C4DH31 117 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 SNURFLB1AK76 121 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 MGST3O14880 152 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 CRYBB3P26998 211 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 OR10J1P30954 320 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 GNG10P50151 68 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 LOXL3P58215 753 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 PSG5Q15238 335 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 C1orf194Q5T5A4 169 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 Q6ZWC4 215 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 DOLPP1Q86YN1 238 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 SLC24A4Q8NFF2 622 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 OR1L6Q8NGR2 347 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 ENY2Q9NPA8 101 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 CDX4O14627 284 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 RHOBP62745 196 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 FXYD3Q14802 87 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 CT45A1Q5HYN5 189 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 CT45A3Q8NHU0 189 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 OR2V2Q96R30 315 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 FAM103A1Q9BTL3 118 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 SAMD10Q9BYL1 202 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 TMEM106BQ9NUM4 274 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 CALYQ9NYX4 217 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 ZNRD1Q9P1U0 126 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 JPT1Q9UK76 154 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 TET2Q6N021 2002 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 C19orf67A6NJJ6 358 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 M0R143 59 aa7.62□□□□□ -1.19
LIMCH1-215ENST00000512632 YPEL1O60688 119 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms