RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 OR5AC2Q9NZP5 309 aa8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 GSKIPQ9P0R6 139 aa8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 PAIP2BQ9ULR5 123 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 BOLA1Q9Y3E2 137 aa8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 U3KQ87 197 aa8.4□□□□□ -1.06
PDLIM5-217ENST00000512274 ODF3BA8MYP8 253 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 MED6O75586 246 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 S1PR2O95136 353 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 HRASP01112 189 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 IFNA7P01567 189 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 IGHV4-59P01825 116 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 MC5RP33032 325 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 RAB13P51153 203 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 EIF5AP63241 154 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 CD69Q07108 199 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 HABP2Q14520 560 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 NDUFA5Q16718 116 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 LTC4SQ16873 150 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 RTL8BQ17RB0 113 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 LRRC37A5PQ49AS3 106 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 UTF1Q5T230 341 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 Q6ZRM9 215 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM86BQ8N661 226 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 Q8N7P7 452 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 OR13D1Q8NGV5 346 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 DCUN1D4Q92564 292 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 RNF5Q99942 180 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 CACNG5Q9UF02 275 aa8.39□□□□□ -1.07
PDLIM5-217ENST00000512274 IGHV2-70DA0A0C4DH43 119 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 KANTRA0A1W2PQU2 76 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 INS-IGF2F8WCM5 200 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 H0YJW9 148 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 FCGR3BO75015 233 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 TSC22D2O75157 780 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 APOA2P02652 100 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 DLX1P56177 255 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 RPL15P61313 204 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 ERVK-16P61578 105 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 TNFRSF9Q07011 255 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 ZNF680Q8NEM1 530 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 OR4P4Q8NGL7 312 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 OR10X1Q8NGY0 326 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 OR4A5Q8NH83 315 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 SSMEM1Q8WWF3 244 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 SMIM8Q96KF7 97 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 ARPC5LQ9BPX5 153 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 NABP2Q9BQ15 211 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 SLC25A31Q9H0C2 315 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 SIRPDQ9H106 197 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 BET1LQ9NYM9 111 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 ZNF257Q9Y2Q1 563 aa8.38□□□□□ -1.07
PDLIM5-217ENST00000512274 NOTCH3Q9UM47 2321 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 BUB1B-PAK6H3BSN5 160 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 SYNGR2O43760 224 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 LGALS7P47929 136 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 S100A10P60903 97 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 NSUN5P1Q3KNT7 163 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 CXorf66Q5JRM2 361 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 OR8H3Q8N146 312 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 OR4C13Q8NGP0 309 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 RNASE11Q8TAA1 199 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 VSTM2AQ8TAG5 236 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 LEAP2Q969E1 77 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 SLC35D1Q9NTN3 355 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 TMEM14BQ9NUH8 114 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 FOXA2Q9Y261 457 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
PDLIM5-217ENST00000512274 MSGN1A6NI15 193 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 JTBO76095 146 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 KRASP01116 189 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 G6PCP35575 357 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 CEACAM3P40198 252 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 GNG10P50151 68 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 PAX9P55771 341 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 SPCS3P61009 180 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 HCP5Q6MZN7 132 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 TGIF2LXQ8IUE1 241 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 UBAC2Q8NBM4 344 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 RHOVQ96L33 236 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 ARV1Q9H2C2 271 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 CYTL1Q9NRR1 136 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 WASHC3Q9Y3C0 194 aa8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 TBL2Q9Y4P3 447 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-217ENST00000512274 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms