RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 LYNX1G3V0Z9 82 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 MLNRO43193 412 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 SNRPCP09234 159 aaKnown RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 LYNX1P0DP58 116 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 GAMTQ14353 236 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 FAM169BQ8N8A8 192 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 NCOR2Q9Y618 2525 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 RNF212Q495C1 297 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 TMEM204Q9BSN7 226 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 CA2P00918 260 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 FAM74A7A6NL05 159 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 FCN1O00602 326 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 HSBP1O75506 76 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 NDUFB4O95168 129 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 IGHV3-48P01763 117 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 RAB5AP20339 215 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 SSBP3Q9BWW4 388 aaPredicted RBP10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
PCDHA4-202ENST00000512229 RAMP3O60896 148 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 REG1AP05451 166 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 RPRMLQ8N4K4 120 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 PLAUP00749 431 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 FAM162BQ5T6X4 162 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 Q6P435 159 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 PCSK4Q6UW60 755 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 SLC16A13Q7RTY0 426 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 RCC1LQ96I51 464 aaKnown RBP10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 P2RX4Q99571 388 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 RARRES2Q99969 163 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 MRPL20Q9BYC9 149 aaKnown RBP10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 CBLN4Q9NTU7 201 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 ZNF586Q9NXT0 402 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 RBFOX2O43251 390 aaKnown RBP eCLIP10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 BATFQ16520 125 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 C16orf82Q7Z2V1 217 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 OR4A5Q8NH83 315 aa10.93□□□□□ -0.66
PCDHA4-202ENST00000512229 TRBV6-6A0A0A6YYG2 114 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 CDKN1AP38936 164 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 PPOXP50336 477 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 DPRXA6NFQ7 191 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 RD3LP0DJH9 198 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 TCF15Q12870 199 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 UNQ5815/PRO19632Q6UWF5 114 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 HS3ST6Q96QI5 342 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 CAMPP49913 170 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 TCL1AP56279 114 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 DEFA6Q01524 100 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 BIVMQ86UB2 503 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 LDLRAD3Q86YD5 345 aa10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 RPUSD1Q9UJJ7 312 aaKnown RBP10.92□□□□□ -0.66
PCDHA4-202ENST00000512229 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 FXYD3Q14802 87 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 OR5R1Q8NH85 324 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 DPF1Q92782 380 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 C12orf57Q99622 126 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 GGACTQ9BVM4 153 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 SPRY4Q9C004 299 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 FBXL15Q9H469 300 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 ZNF503-AS2A6NEH8 195 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 H0Y8G0 127 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 TNFSF13O75888 250 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 COL8A1P27658 744 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 AARDQ4LEZ3 155 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 Q6ZS49 121 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 OR4D5Q8NGN0 318 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 LHFPL5Q8TAF8 219 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 TXN2Q99757 166 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 NPCDR1Q9BY65 106 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 KIAA1324LA8MWY0 1029 aaPredicted RBP10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 LCN2P80188 198 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 ZNF273Q14593 569 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 UNQ6494/PRO21346Q6UXR6 183 aa10.91□□□□□ -0.66
PCDHA4-202ENST00000512229 ZNF788Q6ZQV5 615 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms