RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 NANOGP1Q8N7R0 232 aa9.66□□□□□ -0.86
POLR2J3-216ENST00000511773 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
POLR2J3-216ENST00000511773 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
POLR2J3-216ENST00000511773 AK6Q9Y3D8 172 aaKnown RBP9.66□□□□□ -0.86
POLR2J3-216ENST00000511773 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 IGHV4-4A0A075B6R2 117 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 TGOLN2O43493 480 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 DENRO43583 198 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 UCHL1P09936 223 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 CD37P11049 281 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 CD36P16671 472 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 HLA-GP17693 338 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 RPL8P62917 257 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 FAM3DQ96BQ1 224 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 SPATA2Q9UM82 520 aa9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 RBMX2Q9Y388 322 aaKnown RBP9.65□□□□□ -0.86
POLR2J3-216ENST00000511773 HSPG2P98160 4391 aa9.65□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 TMEM272A0A1B0GTI8 110 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 CGB1A6NKQ9 187 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 NFYAP23511 347 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 PTBP1P26599 531 aaKnown RBP eCLIP9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 TALDO1P37837 337 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 KLK9Q2XQG4 91 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 C2orf76Q3KRA6 126 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 PQLC1Q8N2U9 271 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 PSORS1C1Q9UIG5 152 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 KLK9Q9UKQ9 250 aa9.64□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV3-21A0A0B4J1V1 117 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 IGLV2-14P01704 120 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 ADMP35318 185 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 OR2B8PP59922 312 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 TMEM187Q14656 261 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 Q6ZTC4 211 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 GBGT1Q8N5D6 347 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 RNF2Q99496 336 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 HRASLSQ9HDD0 168 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 TAS2R8Q9NYW2 309 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 THYN1Q9P016 225 aa9.63□□□□□ -0.87
POLR2J3-216ENST00000511773 IGKV1D-13A0A0B4J2D9 117 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 IGLC7A0M8Q6 106 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 NDUFA4O00483 81 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 MFNGO00587 321 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 HRASP01112 189 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 IGKV1-13P0DP09 117 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 GADD45AP24522 165 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 HES5Q5TA89 166 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 LAIR2Q6ISS4 152 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 NR2C2APQ86WQ0 139 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 Q8NAQ8 132 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 UBAC2Q8NBM4 344 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 BPIFB6Q8NFQ5 453 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 OR10R2Q8NGX6 335 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 HSD17B10Q99714 261 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 CHRDL1Q9BU40 450 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 MND1Q9BWT6 205 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 HRH4Q9H3N8 390 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 S100A14Q9HCY8 104 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 RAB22AQ9UL26 194 aa9.62□□□□□ -0.87
POLR2J3-216ENST00000511773 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV4-28A0A0C4DH34 117 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 MRPS14O60783 128 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 HIST1H1DP16402 221 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 TIMM50Q3ZCQ8 353 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 LIPKQ5VXJ0 399 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 CENPSQ8N2Z9 138 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 VN1R17PQ8TDU5 208 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 SMPXQ9UHP9 88 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 ELF5Q9UKW6 265 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 OR2W1Q9Y3N9 320 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 ETV7Q9Y603 341 aa9.61□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 TRAV3A0A0B4J244 114 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 CYB5BO43169 146 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 TNFSF12O43508 249 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 HLA-DQB1P01920 261 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 GNAO1P09471 354 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 RPS25P62851 125 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 SPHARQ15513 63 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 LEMD1Q68G75 181 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 PVRIGQ6DKI7 326 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 SLC25A24Q6NUK1 477 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 SPSB3Q6PJ21 355 aa9.6□□□□□ -0.87
POLR2J3-216ENST00000511773 TMEM91Q6ZNR0 172 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms