RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 F2RP25116 425 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 OPRK1P41145 380 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 FXYD4P59646 89 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 SUMO1P63165 101 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DHRS2Q13268 280 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DYRK1AQ13627 763 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 OR8G2PQ6IF36 304 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 Q6ZRG5 221 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C1orf229Q6ZS94 237 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HAPLN4Q86UW8 402 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 NAA40Q86UY6 237 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 GBGT1Q8N5D6 347 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 SYT8Q8NBV8 401 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 BEST4Q8NFU0 473 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RHOXF1Q8NHV9 184 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 NIPSNAP3BQ9BS92 247 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 KRTAP4-8Q9BYQ9 185 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C20orf27Q9GZN8 174 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 BANF2Q9H503 90 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 SLC2A9Q9NRM0 540 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RHBDL2Q9NX52 303 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 BET1LQ9NYM9 111 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DOK5Q9P104 306 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 KLHDC2Q9Y2U9 406 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 COX11Q9Y6N1 276 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TRAV1-2A0A0B4J238 106 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 A0A1B0GW55 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 A0A1W2PPI3 338 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RBMY1BA6NDE4 496 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RBMY1EA6NEQ0 496 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DCTN6O00399 190 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 FFAR1O14842 300 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HPGDSO60760 199 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 IL6RP08887 468 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RBMY1DP0C7P1 496 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RAB2AP61019 212 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 AKR1C1Q04828 323 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HIST2H2BDQ6DRA6 164 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4L9Q6RFH8 374 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TCF24Q7RTU0 167 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 LGI3Q8N145 548 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 OR4C16Q8NGL9 310 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 OR1L4Q8NGR5 311 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 OR51H1Q8NH63 302 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 FCAMRQ8WWV6 532 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C11orf54Q9H0W9 315 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 ZFAND3Q9H8U3 227 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 LINC00574Q9H8X3 128 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PRELID1Q9Y255 219 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TMEM56-RWDD3S4R434 201 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PCNX3Q9H6A9 2034 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TRAV18A0A075B6X5 111 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TRAV3A0A0B4J244 114 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C15orf61A6NNL5 157 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 SNRPGP15A8MWD9 76 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 K7EP13 123 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RGS5O15539 181 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 CA1P00915 261 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 IGHV4-30-4P0DP06 118 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 FOLR2P14207 255 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HIST1H1DP16402 221 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 CNTFRP26992 372 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 LEPP41159 167 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PPT1P50897 306 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HMGN3Q15651 99 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 UBE2V2Q15819 145 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 MSMPQ1L6U9 139 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 CDNFQ49AH0 187 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C14orf177Q52M58 125 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 FFAR4Q5NUL3 377 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 HES5Q5TA89 166 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 TMEM236Q5W0B7 351 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PVRIGQ6DKI7 326 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 Q6ZPA2 131 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 WFDC3Q8IUB2 231 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 NANOGP1Q8N7R0 232 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 Q8N9W7 124 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 UHRF2Q96PU4 802 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 RAB40CQ96S21 281 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 C20orf85Q9H1P6 137 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 GPN1Q9HCN4 374 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 S100A14Q9HCY8 104 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 PLCXD1Q9NUJ7 323 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 MRPS18AQ9NVS2 196 aaKnown RBP2.23□□□□□ -2.05
CLOCK-209ENST00000511124 SCOCQ9UIL1 159 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 NUBP2Q9Y5Y2 271 aa2.23□□□□□ -2.05
CLOCK-209ENST00000511124 EXPH5Q8NEV8 1989 aa2.22□□□□□ -2.05
CLOCK-209ENST00000511124 NOTCH3Q9UM47 2321 aa2.22□□□□□ -2.05
CLOCK-209ENST00000511124 ITPR3Q14573 2671 aa2.22□□□□□ -2.05
CLOCK-209ENST00000511124 TRAV8-6A0A0B4J262 113 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms