RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR4A5Q8NH83 315 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SLC25A38Q96DW6 304 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 RYR2Q92736 4967 aa11.62□□□□□ -0.55
TPM3-219ENST00000509409 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 LCE6AA0A183 80 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 A0A1B0GW64 132 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 CTRB1P17538 263 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 CBX5P45973 191 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 MSMO1Q15800 293 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 NEDD8Q15843 81 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 CTRB2Q6GPI1 263 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
TPM3-219ENST00000509409 AUNIPQ9H7T9 357 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 ZC4H2Q9NQZ6 224 aa11.61□□□□□ -0.55
TPM3-219ENST00000509409 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
TPM3-219ENST00000509409 MEIS3P1A6NDR6 274 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
TPM3-219ENST00000509409 HPRT1P00492 218 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 CLEC3BP05452 202 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
TPM3-219ENST00000509409 NQO2P16083 231 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 CBLN1P23435 193 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 TAS2R31P59538 309 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 ZNF57Q68EA5 555 aaPredicted RBP11.6□□□□□ -0.55
TPM3-219ENST00000509409 SLC16A13Q7RTY0 426 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 TMEM17Q86X19 198 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 DMBX1Q8NFW5 382 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 CACNG8Q8WXS5 425 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 CCDC140Q96MF4 163 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 WFDC10AQ9H1F0 79 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 IFT46Q9NQC8 304 aa11.6□□□□□ -0.55
TPM3-219ENST00000509409 STARD9Q9P2P6 4700 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 TRAV3A0A0B4J244 114 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 UPK2O00526 184 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 RPA2P15927 270 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 HERV-K104P61576 105 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 AADACL3Q5VUY0 350 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 LINC00322Q6ZN03 302 aaPredicted RBP11.59□□□□□ -0.55
TPM3-219ENST00000509409 ZNF818PQ6ZRF7 136 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 UXS1Q8NBZ7 420 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 OR5AP2Q8NGF4 316 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 IL17DQ8TAD2 202 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 CD300LFQ8TDQ1 290 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 GIMAP1Q8WWP7 306 aa11.59□□□□□ -0.55
TPM3-219ENST00000509409 S100A16Q96FQ6 103 aaKnown RBP11.59□□□□□ -0.55
TPM3-219ENST00000509409 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 CGB1A6NKQ9 187 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
TPM3-219ENST00000509409 OR2B8PP59922 312 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 OR52B4Q8NGK2 314 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 LYSTQ99698 3801 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 EHFQ9NZC4 300 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 THYN1Q9P016 225 aa11.58□□□□□ -0.56
TPM3-219ENST00000509409 MFSD2BA6NFX1 497 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 CYB5BO43169 146 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 XRCC3O43542 346 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
TPM3-219ENST00000509409 GPR183P32249 361 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 ERVK-16P61578 105 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 PLET1Q6UQ28 207 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
TPM3-219ENST00000509409 BORCS5Q969J3 196 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 TMEM140Q9NV12 185 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 MLXQ9UH92 298 aa11.57□□□□□ -0.56
TPM3-219ENST00000509409 IGHV3-35A0A0C4DH35 117 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 TMEM127O75204 238 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 S1PR2O95136 353 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 PMP2P02689 132 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 TRAPPC2P0DI81 140 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 TRAPPC2BP0DI82 140 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 RFX2P48378 723 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 KLK9Q2XQG4 91 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 BTNL8Q6UX41 500 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 TMEM61Q8N0U2 210 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 SRSF8Q9BRL6 282 aaKnown RBP11.56□□□□□ -0.56
TPM3-219ENST00000509409 ZNF2Q9BSG1 426 aaPredicted RBP11.56□□□□□ -0.56
TPM3-219ENST00000509409 HINT2Q9BX68 163 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
TPM3-219ENST00000509409 PLEKHA2Q9HB19 425 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 KLK9Q9UKQ9 250 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 CSMD3Q7Z407 3707 aa11.56□□□□□ -0.56
TPM3-219ENST00000509409 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms