RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HRASLSQ9HDD0 168 aa9.43□□□□□ -0.9
PDPN-208ENST00000509009 TECRQ9NZ01 308 aaKnown RBP9.43□□□□□ -0.9
PDPN-208ENST00000509009 IGLV11-55A0A075B6I3 123 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 RBMY1BA6NDE4 496 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 MEIS3P1A6NDR6 274 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 RBMY1EA6NEQ0 496 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 UPK2O00526 184 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 TPPPO94811 219 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 DHFRP00374 187 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 HPRT1P00492 218 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 IFNA6P05013 189 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 REG1AP05451 166 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 CLEC3BP05452 202 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 RBMY1DP0C7P1 496 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 NQO2P16083 231 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 CBLN1P23435 193 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 GNRHRP30968 328 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 ARL3P36405 182 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 RPS19P39019 145 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 TAS2R31P59538 309 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 FXYD4P59646 89 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 CD81P60033 236 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 FAM106AQ4KMX7 169 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 DEFB125Q8N687 156 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 DYNLRB2Q8TF09 96 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 ISOC1Q96CN7 298 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 S100A16Q96FQ6 103 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 PLEKHA3Q9HB20 300 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
PDPN-208ENST00000509009 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
PDPN-208ENST00000509009 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 DEFA4P12838 97 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 TGFBR1P36897 503 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 RFX2P48378 723 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 CATR1Q13166 79 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 GUCA2BQ16661 112 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 CROCCP3Q8IVE0 287 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 CD300LFQ8TDQ1 290 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 HIPK2Q9H2X6 1198 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 CEPT1Q9Y6K0 416 aa9.41□□□□□ -0.9
PDPN-208ENST00000509009 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 LCE6AA0A183 80 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 IGLC7A0M8Q6 106 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 TMEM213A2RRL7 107 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 MFSD2BA6NFX1 497 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 NAT1P18440 290 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 TMEM17Q86X19 198 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 UXS1Q8NBZ7 420 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 OR51H1Q8NH63 302 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 WDR89Q96FK6 387 aaPredicted RBP9.4□□□□□ -0.9
PDPN-208ENST00000509009 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 SRSF8Q9BRL6 282 aaKnown RBP9.4□□□□□ -0.9
PDPN-208ENST00000509009 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 ANAPC10Q9UM13 185 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
PDPN-208ENST00000509009 TEX50A0A1B0GTY4 177 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 PGLYRP1O75594 196 aaPredicted RBP9.39□□□□□ -0.91
PDPN-208ENST00000509009 S1PR2O95136 353 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 PMP2P02689 132 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 FGF2P09038 288 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 RPA2P15927 270 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 F2RP25116 425 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 PTBP1P26599 531 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDPN-208ENST00000509009 HERV-K104P61576 105 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 TM4SF20Q53R12 229 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
PDPN-208ENST00000509009 LYSMD2Q8IV50 215 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 YIPF6Q96EC8 236 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 RETNQ9HD89 108 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 IFT46Q9NQC8 304 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 MLXQ9UH92 298 aa9.39□□□□□ -0.91
PDPN-208ENST00000509009 SACSQ9NZJ4 4579 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 A8MWP6 167 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 TRAPPC2P0DI81 140 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 TRAPPC2BP0DI82 140 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 C8orf88P0DMB2 117 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 LPAR6P43657 344 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 TAS2R20P59543 309 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 LSM3P62310 102 aaKnown RBP9.38□□□□□ -0.91
PDPN-208ENST00000509009 UBE2NLQ5JXB2 153 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 TMEM69Q5SWH9 247 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 UNQ9165/PRO28630Q6UXU0 137 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 SAMD12Q8N8I0 201 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 BORCS5Q969J3 196 aa9.38□□□□□ -0.91
PDPN-208ENST00000509009 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms