RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RBM14Q96PK6 669 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 TSNAXQ99598 290 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 MRPL20Q9BYC9 149 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 PARP12Q9H0J9 701 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 RANBP3Q9H6Z4 567 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 MCUBQ9NWR8 336 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 C14orf166Q9Y224 244 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1B0GUS0 222 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 H7C2Y5 167 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 LYRM1O43325 122 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 CREBL2O60519 120 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 NDUFB6O95139 128 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 HPRT1P00492 218 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 HRASP01112 189 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGKV1D-33P01593 117 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGKV1-33P01594 117 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 CLEC3BP05452 202 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 SNRNP70P08621 437 aaKnown RBP4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 FGF2P09038 288 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM11P17152 192 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 F2RP25116 425 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC6A1P30531 599 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 REG1BP48304 166 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 RIPPLY3P57055 190 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 TAS2R31P59538 309 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 UBA52P62987 128 aaKnown RBP4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 DHODHQ02127 395 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 DIAPH2-AS1Q14236 149 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 HES1Q14469 280 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 Q8N6K4 173 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF383Q8NA42 475 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4D10Q8NGI6 311 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR13C8Q8NGS7 320 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 VSTM2AQ8TAG5 236 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 MARCH1Q8TCQ1 289 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 TCTEX1D2Q8WW35 142 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 FXYD6Q9H0Q3 95 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 ALX4Q9H161 411 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC2A9Q9NRM0 540 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC35D1Q9NTN3 355 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 COMMD9Q9P000 198 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 KIAA1456Q9P272 454 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 KCNIP3Q9Y2W7 256 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 MOB4Q9Y3A3 225 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 PLXNB1O43157 2135 aa4.36□□□□□ -1.71
HMGB1P44-201ENST00000508597 COL6A5A8TX70 2615 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 MDFIC2A0A1B0GVS7 189 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM240BA0A1B0GVZ2 78 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 PGPEP1LA6NFU8 196 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 CRYM-AS1A6NIL9 109 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 H0Y980 276 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 J3QRK9 145 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 NBR2O15453 112 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 PLA2G10O15496 165 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 KCNAB3O43448 404 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 GPR137BO60478 399 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 FCGR3BO75015 233 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 TSPAN9O75954 239 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 NDUFA3O95167 84 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 NDUFA7O95182 113 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGHV4-59P01825 116 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 ANXA3P12429 323 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 NQO2P16083 231 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 RAG2P55895 527 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 PIGPP57054 158 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SRPXP78539 464 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 POU2AF1Q16633 256 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 VMA21Q3ZAQ7 101 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM128Q5BJH2 165 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAAP20Q6NZ36 180 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 TBC1D26Q86UD7 250 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SGPP2Q8IWX5 399 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SPAG16Q8N0X2 631 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 TEX45Q8NA69 505 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 DUSP18Q8NEJ0 188 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4A5Q8NH83 315 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM170AQ8WVE7 144 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 IL22RA2Q969J5 263 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 GALNT14Q96FL9 552 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 C5orf30Q96GV9 206 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 RASL11BQ9BPW5 248 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 RTBDNQ9BSG5 229 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC25A33Q9BSK2 321 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 CHIAQ9BZP6 476 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 C5orf66Q9H5L9 145 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 ESM1Q9NQ30 184 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 PEMTQ9UBM1 199 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 CACFD1Q9UGQ2 172 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 SOX21Q9Y651 276 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 CUBNO60494 3623 aa4.35□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGHV3-72A0A0B4J1Y9 119 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 TEX13DA0A0J9YY54 714 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 C3orf85A0A1B0GTC6 90 aa4.34□□□□□ -1.71
HMGB1P44-201ENST00000508597 DUXBA0A1W2PPF3 345 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms