RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 C5orf66Q9H5L9 145 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 NAA60Q9H7X0 242 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 AKIP1Q9NQ31 210 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 ZNF355PQ9NSJ1 428 aa7.17□□□□□ -1.26
NUP54-207ENST00000508583 A0A0G2JLM5 398 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 MSGN1A6NI15 193 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 CRYM-AS1A6NIL9 109 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 G3V318 75 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 UPK2O00526 184 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 ARPC1BO15143 372 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 RBMXL2O75526 392 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 BRI3O95415 125 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 IGLV1-40P01703 118 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 UCP1P25874 307 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 G6PCP35575 357 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 CDX1P47902 265 aaPredicted RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 UBE2MP61081 183 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 PJVKQ0ZLH3 352 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 BAK1Q16611 211 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 ZNF585BQ52M93 769 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 TMEM128Q5BJH2 165 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 C19orf54Q5BKX5 351 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 ZNF695Q8IW36 515 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 FAM219AQ8IW50 185 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 KLHL30-AS1Q8NEE0 82 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 OR5B3Q8NH48 314 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 OR4A16Q8NH70 328 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 RBPMSQ93062 196 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 GALNT14Q96FL9 552 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 UBE2E2Q96LR5 201 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 RTBDNQ9BSG5 229 aaPredicted RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 FAM103A1Q9BTL3 118 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 PDCD10Q9BUL8 212 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
NUP54-207ENST00000508583 TMEM222Q9H0R3 208 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 VSIG4Q9Y279 399 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 ZNF257Q9Y2Q1 563 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 FBXO7Q9Y3I1 522 aa7.16□□□□□ -1.26
NUP54-207ENST00000508583 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 NPIPB5A8MRT5 1133 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
NUP54-207ENST00000508583 OR5AC1P0C628 307 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 OR9G9P0C7N8 305 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.26
NUP54-207ENST00000508583 AKR1C4P17516 323 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 RAB9AP51151 201 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 RAB25P57735 213 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 TCTEX1D4Q5JR98 221 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 MZT2BQ6NZ67 158 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 TMED4Q7Z7H5 227 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 CENPSQ8N2Z9 138 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 OR1L8Q8NGR8 309 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 FAM110DQ8TAY7 271 aaPredicted RBP7.15□□□□□ -1.26
NUP54-207ENST00000508583 IL22RA2Q969J5 263 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 MRGPRFQ96AM1 343 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 SEC22AQ96IW7 307 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 USMG5Q96IX5 58 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 TMEM56Q96MV1 263 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 FYTTD1Q96QD9 318 aaKnown RBP7.15□□□□□ -1.26
NUP54-207ENST00000508583 TP53RKQ96S44 253 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 SDHCQ99643 169 aaPredicted RBP7.15□□□□□ -1.26
NUP54-207ENST00000508583 COA4Q9NYJ1 87 aa7.15□□□□□ -1.26
NUP54-207ENST00000508583 C13orf42A0A1B0GVH6 325 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 FAM223BA6NKX1 122 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 C15orf61A6NNL5 157 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 LYRM1O43325 122 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 NDUFB6O95139 128 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 CDS2O95674 445 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 TRGV3P03979 118 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 IL6RP08887 468 aaPredicted RBP7.14□□□□□ -1.27
NUP54-207ENST00000508583 TRAPPC2P0DI81 140 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 TRAPPC2BP0DI82 140 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 DEFA4P12838 97 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 HIST1H1BP16401 226 aaKnown RBP7.14□□□□□ -1.27
NUP54-207ENST00000508583 TPPP2P59282 170 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 SSBP2P81877 361 aaPredicted RBP7.14□□□□□ -1.27
NUP54-207ENST00000508583 C10orf99Q6UWK7 81 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 ZNF429Q86V71 674 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 FAM223AQ8IWN6 122 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 LGI3Q8N145 548 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 OR1L6Q8NGR2 347 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 MYOZ3Q8TDC0 251 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 LSM10Q969L4 123 aaKnown RBP7.14□□□□□ -1.27
NUP54-207ENST00000508583 TMEM14BQ9NUH8 114 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 THYN1Q9P016 225 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 OR51B2Q9Y5P1 312 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 TMEM56-RWDD3S4R434 201 aa7.14□□□□□ -1.27
NUP54-207ENST00000508583 WNK1Q9H4A3 2382 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 LINC00854A0A1B0GVQ3 168 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 DUXBA0A1W2PPF3 345 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 DUS4LO95620 317 aaKnown RBP7.13□□□□□ -1.27
NUP54-207ENST00000508583 TSPAN15O95858 294 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 OR8U8P0C7N1 319 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 VAMP1P23763 118 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 MYCNOSP40205 109 aa7.13□□□□□ -1.27
NUP54-207ENST00000508583 MECP2P51608 486 aaKnown RBP7.13□□□□□ -1.27
NUP54-207ENST00000508583 DEFA1P59665 94 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms