RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SCN10AQ9Y5Y9 1956 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1D-43A0A0B4J1Z2 117 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 TRAV5A0A0B4J249 113 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 TRAV41A0A0B4J266 112 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 LOC100130705A0A1B0GUX0 176 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 DHRS12A0PJE2 317 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 DPRXA6NFQ7 191 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 HLA-DQB1P01920 261 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 SEC11BP0C7V7 166 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 NTF3P20783 257 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 CSRP1P21291 193 aaKnown RBP3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 S100A2P29034 98 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 OPRM1P35372 400 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 PPP3R1P63098 170 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 PDGFRLQ15198 375 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 LYRM7Q5U5X0 104 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 OR4K5Q8NGD3 323 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 OR52R1Q8NGF1 315 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF418Q8TF45 676 aaPredicted RBP3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 DERL3Q96Q80 235 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 CHAC1Q9BUX1 264 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 RTL8AQ9BWD3 113 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 FGF23Q9GZV9 251 aaPredicted RBP3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 CST9LQ9H4G1 147 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 DOCK5Q9H7D0 1870 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 FGF22Q9HCT0 170 aa3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 MRPS16Q9Y3D3 137 aaKnown RBP3.06□□□□□ -1.92
SMARCA5-202ENST00000508573 MIA3Q5JRA6 1907 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 TTC37Q6PGP7 1564 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 BCL9LQ86UU0 1499 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 PRG4Q92954 1404 aaPredicted RBP3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 TRBV20OR9-2A0A075B6H5 130 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 IGHV1-45A0A0A0MS14 117 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 EPM2AB3EWF7 344 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 C9JQL5 133 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 CA7P43166 264 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 INSL3P51460 131 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF83P51522 516 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 PKIAP61925 76 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 SP6Q3SY56 376 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 PRR15Q8IV56 129 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 RAB2BQ8WUD1 216 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 GTSF1Q8WW33 167 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 BORCS8Q96FH0 119 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 NRTNQ99748 197 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 SPIN2AQ99865 258 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 SPIN2BQ9BPZ2 258 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 SLC25A21Q9BQT8 299 aaPredicted RBP3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 AICDAQ9GZX7 198 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 GFRA4Q9GZZ7 299 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 HEXA-AS1Q9H8Q6 139 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 OTORQ9NRC9 128 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 DEC1Q9P2X7 70 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 LAMTOR3Q9UHA4 124 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 TAC3Q9UHF0 121 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 ZFP30Q9Y2G7 519 aa3.05□□□□□ -1.92
SMARCA5-202ENST00000508573 MBD5Q9P267 1494 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 FMN1Q68DA7 1419 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 ADAMTS13Q76LX8 1427 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 PDS5BQ9NTI5 1447 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 IGHV3-72A0A0B4J1Y9 119 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TRAV38-1A0A0B4J264 116 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV3D-20A0A0C4DH25 116 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1-12A0A0C4DH73 117 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 SPAARA0A1B0GVQ0 90 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 DPM2O94777 84 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 LY6G6DO95868 133 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1D-12P01611 117 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 MT-ND4LP03901 98 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 UCHL1P09936 223 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 P0DMU3 169 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 FAM231AP0DMU4 169 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 FAM231CP0DMU5 169 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 LINC00694P0DN24 101 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF823P16415 610 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 FGF7P21781 194 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 RAB5CP51148 216 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 HBA1P69905 142 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 MPV17L2Q567V2 206 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 GLT8D1Q68CQ7 371 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 LAIR2Q6ISS4 152 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 CGB2Q6NT52 195 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TEX261Q6UWH6 196 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 GLIPR1L1Q6UWM5 242 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 PDPNQ86YL7 162 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 GPHB5Q86YW7 130 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 SLC25A29Q8N8R3 303 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 ZDHHC22Q8N966 263 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 MAL2Q969L2 176 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM106AQ96A25 262 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 SLAMF6Q96DU3 332 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TSSK6Q9BXA6 273 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 IMUPQ9GZP8 106 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 TAF9BQ9HBM6 251 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 AK3Q9UIJ7 227 aa3.04□□□□□ -1.92
SMARCA5-202ENST00000508573 MCTS1Q9ULC4 181 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms