RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NECAP1Q8NC96 275 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ST6GALNAC3Q8NDV1 305 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR52M1Q8NGK5 317 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR10G9Q8NGN4 311 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR2AJ1Q8NGZ0 328 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR52N5Q8NH56 324 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 OR2AE1Q8NHA4 323 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CT45A3Q8NHU0 189 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 RNF133Q8WVZ7 376 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 RTN4IP1Q8WWV3 396 aaPredicted RBP3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 KLK6Q92876 244 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 C10orf35Q96D05 121 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 ZNF681Q96N22 645 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TSSK2Q96PF2 358 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 CHRDL1Q9BU40 450 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 LRRC61Q9BV99 259 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 RSPO3Q9BXY4 272 aaPredicted RBP3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TTTY10Q9BZA0 68 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PLA2G2FQ9BZM2 168 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 LINC00470Q9BZP3 86 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 TMEM191AQ9H0A3 160 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 SCRT2Q9NQ03 307 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 KCNIP2Q9NS61 270 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 NAT8BQ9UHF3 227 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 HS3ST2Q9Y278 367 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 POLR1DQ9Y2S0 133 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 MRPS18BQ9Y676 258 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 APC2O95996 2303 aa3.78□□□□□ -1.8
PDLIM5-211ENST00000508531 PTPRQQ9UMZ3 2332 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 KALRNO60229 2985 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ASCC3Q8N3C0 2202 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 A0A1B0GV50 99 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 NPIPB15A6NHN6 443 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ANKRD30BLA7E2S9 258 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 FAM90A26D6RGX4 464 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 H0YJW9 148 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 H7C1C5 153 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SLC33A1O00400 549 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SDCBPO00560 298 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 FCN1O00602 326 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TAX1BP3O14907 124 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GAGE7O76087 117 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TSPAN13O95857 204 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR9G9P0C7N8 305 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GAGE12FP0CL80 117 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GAGE12GP0CL81 117 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GAGE12IP0CL82 117 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CCL2P13500 99 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF823P16415 610 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 AZU1P20160 251 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 COX5AP20674 150 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GZMHP20718 246 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CRYBB3P26998 211 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SSTR5P35346 364 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OPRM1P35372 400 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CCR2P41597 374 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 DYNLT3P51808 116 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 RIPPLY3P57055 190 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TCTAP57738 103 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 BRWD1-AS2P59051 145 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 MRPS34P82930 218 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 PSG9Q00887 426 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF90Q03938 601 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TAF10Q12962 218 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GAGE4Q13068 117 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SRSF6Q13247 344 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 LTC4SQ16873 150 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 RPEL1Q2QD12 228 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CLLU1OSQ5K130 101 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 WDR82Q6UXN9 313 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ZNF695Q8IW36 515 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SFTPA2Q8IWL1 248 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM256Q8N2U0 113 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR4F17Q8NGA8 305 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR1B1Q8NGR6 318 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR2K2Q8NGT1 345 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CNRIP1Q96F85 164 aaPredicted RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 C5orf30Q96GV9 206 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GRAMD2BQ96HH9 432 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR2A5Q96R48 311 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 OR4F4Q96R69 305 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 DERL1Q9BUN8 251 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TM2D1Q9BX74 207 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TMEM222Q9H0R3 208 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 GEMIN7Q9H840 131 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 SLC7A10Q9NS82 523 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 IL36BQ9NZH7 164 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 IL36GQ9NZH8 169 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ANXA10Q9UJ72 324 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 LSM7Q9UK45 103 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 CES1P1Q9UKY3 287 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 WASHC3Q9Y3C0 194 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 ARL2-SNX15V9GYD0 113 aa3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 HELZP42694 1942 aaKnown RBP3.77□□□□□ -1.81
PDLIM5-211ENST00000508531 TEX15Q9BXT5 2789 aa3.76□□□□□ -1.81
PDLIM5-211ENST00000508531 NOTCH2Q04721 2471 aa3.76□□□□□ -1.81
PDLIM5-211ENST00000508531 SPTAN1Q13813 2472 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms