RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 E7EUB6 86 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 NAT1P18440 290 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 ZP3P21754 424 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 AADACP22760 399 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 TAS2R19P59542 299 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 KCTD9Q7L273 389 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 GVQW1Q8N7I0 195 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 OR9G4Q8NGQ1 327 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 PHB2Q99623 299 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 RSRP1Q9BUV0 290 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 ANAPC10Q9UM13 185 aa12.36□□□□□ -0.43
LMNA-222ENST00000508500 CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 A0A1B0GW64 132 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 CSN3P07498 182 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 AKAIN1P0CW23 69 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 C19orf35Q6ZS72 473 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 ELOVL1Q9BW60 279 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 KLK11Q9UBX7 282 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
LMNA-222ENST00000508500 TEX22C9J3V5 150 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 CD74P04233 296 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 MEF2DQ14814 521 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
LMNA-222ENST00000508500 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 ENKURQ8TC29 256 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 IFT46Q9NQC8 304 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 CCL28Q9NRJ3 127 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 C19orf73Q9NVV2 129 aa12.34□□□□□ -0.43
LMNA-222ENST00000508500 FAM240BA0A1B0GVZ2 78 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 C3orf84H3BNL1 204 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 BMPR1BO00238 502 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 SLC22A5O76082 557 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
LMNA-222ENST00000508500 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 MECP2P51608 486 aaKnown RBP12.33□□□□□ -0.44
LMNA-222ENST00000508500 RHOGP84095 191 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 ADAMTSL5Q6ZMM2 481 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 MMD2Q8IY49 270 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 BEST4Q8NFU0 473 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
LMNA-222ENST00000508500 SACSQ9NZJ4 4579 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 CGB1A6NKQ9 187 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 FCER2P06734 321 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 MYOD1P15172 320 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 FCGR2CP31995 323 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 RFX2P48378 723 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 STEAP1BQ6NZ63 245 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 NRARPQ7Z6K4 114 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 TMEM167AQ8TBQ9 72 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 TCTEX1D2Q8WW35 142 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 SNAPC3Q92966 411 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 HSD17B10Q99714 261 aaKnown RBP12.32□□□□□ -0.44
LMNA-222ENST00000508500 HRASLSQ9HDD0 168 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 STARD9Q9P2P6 4700 aa12.32□□□□□ -0.44
LMNA-222ENST00000508500 RYR2Q92736 4967 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 FAM223BA6NKX1 122 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 A8MZ25 164 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 MPPED1O15442 326 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 TNFSF12O43508 249 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 KBTBD11O94819 623 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 OR2A4O95047 310 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 EDN2P20800 178 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 TAS2R46P59540 309 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
LMNA-222ENST00000508500 RPEL1Q2QD12 228 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 RNASE12Q5GAN4 147 aaKnown RBP12.31□□□□□ -0.44
LMNA-222ENST00000508500 ZNF66Q6ZN08 573 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 FAM223AQ8IWN6 122 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 OR2A7Q96R45 310 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 TM2D3Q9BRN9 247 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 SIGLEC8Q9NYZ4 499 aa12.31□□□□□ -0.44
LMNA-222ENST00000508500 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
LMNA-222ENST00000508500 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 OR2J3O76001 311 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 PPYP01298 95 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 ATP5G2Q06055 141 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 FANCD2OSQ96PS1 177 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 SLC2A8Q9NY64 477 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 LYSTQ99698 3801 aa12.3□□□□□ -0.44
LMNA-222ENST00000508500 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
LMNA-222ENST00000508500 ACTL6BO94805 426 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 RAB3DO95716 219 aa12.29□□□□□ -0.44
LMNA-222ENST00000508500 ZNF735P0CB33 412 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms