RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 HSD11B1P28845 292 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 CA5AP35218 305 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 CCR2P41597 374 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 OR4D2P58180 307 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 GNA12Q03113 381 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 TPRXLQ17RH7 258 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 SPOPLQ6IQ16 392 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 LPCAT3Q6P1A2 487 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 TCF24Q7RTU0 167 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 OR6V1Q8N148 313 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 IMMP2LQ96T52 175 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 DCSTAMPQ9H295 470 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 IDI2-AS1Q9NZ38 188 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 GLTPQ9NZD2 209 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 PRELID3BQ9Y3B1 194 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 FHAD1B1AJZ9 1412 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 CLIP1P30622 1438 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 MYOM3Q5VTT5 1437 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 CNTLNQ9NXG0 1405 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 GCC2Q8IWJ2 1684 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 SDK2Q58EX2 2172 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 A0A0G2JQZ4 141 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 PQLC2LA1A4F0 135 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 OR4C46A6NHA9 309 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 KNCNA6PVL3 124 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 PSMD12O00232 456 aaPredicted RBP1.79□□□□□ -2.12
USP53-204ENST00000507906 TXNDC9O14530 226 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 LEPROTO15243 131 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 HAND1O96004 215 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 CBR1P16152 277 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 CD24P25063 80 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 HLA-DMBP28068 263 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 TAS2R20P59543 309 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 AGTRAPQ6RW13 159 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 OR8B12Q8NGG6 310 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 C14orf105Q9NVL8 296 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 FUT9Q9Y231 359 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 SCAPERQ9BY12 1400 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 ADGRL3Q9HAR2 1447 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 MAP3K1Q13233 1512 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 COL4A2P08572 1712 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 TRPM6Q9BX84 2022 aa1.79□□□□□ -2.12
USP53-204ENST00000507906 ZNF638Q14966 1978 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 SIPA1L1O43166 1804 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 ARAP1Q96P48 1450 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 PIK3C2GO75747 1445 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TRBV20OR9-2A0A075B6H5 130 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TRGV5A0A0B4J1U4 118 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TRAV26-2A0A0B4J265 109 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 FNDC10F2Z333 226 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 H3BT86 120 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 IGKV1-5P01602 117 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 HLA-DRB1P01911 266 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TTRP02766 147 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 SRP19P09132 144 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 LGALS1P09382 135 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 ALDH3A1P30838 453 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 S100A7P31151 101 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 RPL28P46779 137 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 MIAQ16674 131 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 Q6ZS49 121 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 C20orf196Q8IYI0 205 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TBC1D19Q8N5T2 526 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 OR5B17Q8NGF7 314 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 ZCCHC13Q8WW36 166 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 ANP32BQ92688 251 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 TSPAN32Q96QS1 320 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 OR52E6Q96RD3 313 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 CCDC94Q9BW85 323 aaPredicted RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 WDR61Q9GZS3 305 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 RNASE7Q9H1E1 156 aaKnown RBP1.78□□□□□ -2.12
USP53-204ENST00000507906 EFCAB1Q9HAE3 211 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 TIMM22Q9Y584 194 aa1.78□□□□□ -2.12
USP53-204ENST00000507906 ITGB4P16144 1822 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 SLX4Q8IY92 1834 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 LRRIQ1Q96JM4 1722 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 TIAM1Q13009 1591 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 MROH2BQ7Z745 1585 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 RTEL1-TNFRSF6BF6WH68 1400 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 SOGA1O94964 1423 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 ARHGAP31Q2M1Z3 1444 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 TRAPPC2LH3BP13 241 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 KCNE1P15382 129 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 CSN1S1P47710 185 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 EVX1P49640 407 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 PSME3P61289 254 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 CAV1Q03135 178 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 KISS1Q15726 138 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 GRK1Q15835 563 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 GLT8D1Q68CQ7 371 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 ZNF767PQ75MW2 155 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 LHFPL1Q86WI0 220 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 KRTAP13-1Q8IUC0 172 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 ZNF676Q8N7Q3 588 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 OR4X1Q8NH49 305 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 PHOSPHO2Q8TCD6 241 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 ROPN1LQ96C74 230 aa1.77□□□□□ -2.13
USP53-204ENST00000507906 C11orf68Q9H3H3 251 aaKnown RBP1.77□□□□□ -2.13
USP53-204ENST00000507906 FAM96AQ9H5X1 160 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms