RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PJVKQ0ZLH3 352 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 PRSS8Q16651 343 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 ZFP69Q49AA0 526 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 SIGLECL1Q8N7X8 197 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 OR8H1Q8NGG4 311 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 RBM14Q96PK6 669 aaKnown RBP13.93□□□□□ -0.18
RNF4-209ENST00000507784 PLSCR3Q9NRY6 295 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
RNF4-209ENST00000507784 FOXA2Q9Y261 457 aaPredicted RBP13.93□□□□□ -0.18
RNF4-209ENST00000507784 NOTCH2Q04721 2471 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 FXYD6-FXYD2A0A087WZ82 144 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 FCN1O00602 326 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 SYNGR2O43760 224 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 CHST1O43916 411 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 C1QBP02746 253 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 PET100P0DJ07 73 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 IAPPP10997 89 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 PVALBP20472 110 aaPredicted RBP13.92□□□□□ -0.18
RNF4-209ENST00000507784 IER3P46695 156 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 SPCS3P61009 180 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 HSPE1P61604 102 aaKnown RBP13.92□□□□□ -0.18
RNF4-209ENST00000507784 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 C11orf87Q6NUJ2 197 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 RBMS3Q6XE24 437 aaKnown RBP13.92□□□□□ -0.18
RNF4-209ENST00000507784 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 Q8N9W7 124 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 ENY2Q9NPA8 101 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 MBD2Q9UBB5 411 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 MOB4Q9Y3A3 225 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
RNF4-209ENST00000507784 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 H0YIZ8 118 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 BOLA2-SMG1P6H3BVE0 249 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 CNIH1O95406 144 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 CA2P00918 260 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 FGF2P09038 288 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 MAS1LP35410 378 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 HOXA1P49639 335 aaPredicted RBP13.91□□□□□ -0.18
RNF4-209ENST00000507784 SCGB2A2Q13296 93 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 PRSS54Q6PEW0 395 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 OR1L8Q8NGR8 309 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 OR5R1Q8NH85 324 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 DCUN1D4Q92564 292 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 RNF126Q9BV68 326 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 HSPB7Q9UBY9 170 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 CACFD1Q9UGQ2 172 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 ZANQ9Y493 2812 aa13.91□□□□□ -0.18
RNF4-209ENST00000507784 G3V3Q6 166 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 HOXA3O43365 443 aaPredicted RBP13.9□□□□□ -0.18
RNF4-209ENST00000507784 DEDDO75618 318 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 SRD5A1P18405 259 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
RNF4-209ENST00000507784 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 C10orf55Q5SWW7 151 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 OR52E5Q8NH55 327 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 ABHD5Q8WTS1 349 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 ZNF257Q9Y2Q1 563 aa13.9□□□□□ -0.18
RNF4-209ENST00000507784 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
RNF4-209ENST00000507784 SLC25A4P12235 298 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 NUP62P37198 522 aaPredicted RBP13.89□□□□□ -0.19
RNF4-209ENST00000507784 RPL23AP62750 156 aaKnown RBP13.89□□□□□ -0.19
RNF4-209ENST00000507784 C9orf152Q5JTZ5 239 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 NOXA1Q86UR1 476 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 OR11H4Q8NGC9 324 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 OR5B3Q8NH48 314 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 GRPEL2Q8TAA5 225 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 DTD1Q8TEA8 209 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 SSMEM1Q8WWF3 244 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 PRDM13Q9H4Q3 707 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 PLEKHA3Q9HB20 300 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 HEYLQ9NQ87 328 aaPredicted RBP13.89□□□□□ -0.19
RNF4-209ENST00000507784 PSENENQ9NZ42 101 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 CDC42EP3Q9UKI2 254 aa13.89□□□□□ -0.19
RNF4-209ENST00000507784 FLNBO75369 2602 aaKnown RBP13.88□□□□□ -0.19
RNF4-209ENST00000507784 INAFM1C9JVW0 142 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 E5RGE8 158 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 GPR137BO60478 399 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 EIF2B2P49770 351 aaKnown RBP13.88□□□□□ -0.19
RNF4-209ENST00000507784 FXYD3Q14802 87 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 C16orf82Q7Z2V1 217 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 ZNF546Q86UE3 836 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 C5orf56Q8N8D9 126 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 HYLS1Q96M11 299 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 RAB40CQ96S21 281 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 HIPK2Q9H2X6 1198 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 ZC4H2Q9NQZ6 224 aa13.88□□□□□ -0.19
RNF4-209ENST00000507784 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
RNF4-209ENST00000507784 ARPC5O15511 151 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 FGF16O43320 207 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 KCNAB3O43448 404 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 COMPP49747 757 aaPredicted RBP13.87□□□□□ -0.19
RNF4-209ENST00000507784 NKX2-5P52952 324 aaPredicted RBP13.87□□□□□ -0.19
RNF4-209ENST00000507784 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
RNF4-209ENST00000507784 DUX5Q96PT3 197 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms