RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 IGLV11-55A0A075B6I3 123 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF320A2RRD8 509 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 MFSD2BA6NFX1 497 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 A8MWP6 167 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 PPYP01298 95 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 FCER2P06734 321 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 HIST1H1BP16401 226 aaKnown RBP8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 FXYD4P59646 89 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 MSMO1Q15800 293 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 KLK9Q2XQG4 91 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF57Q68EA5 555 aaPredicted RBP8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 HOGA1Q86XE5 327 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 SPAG16Q8N0X2 631 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 OR4A5Q8NH83 315 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 IL17DQ8TAD2 202 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 SLC5A7Q9GZV3 580 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 HRASLSQ9HDD0 168 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 MLXQ9UH92 298 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 KLK9Q9UKQ9 250 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 ETV7Q9Y603 341 aa8.67□□□□□ -1.02
HMGCS1-204ENST00000507293 DNAH1Q9P2D7 4330 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 SULT1C2O00338 296 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 JTBO76095 146 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 DEFA4P12838 97 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 SCAND1P57086 179 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 OR2B8PP59922 312 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 CATR1Q13166 79 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 FAM106AQ4KMX7 169 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 SLC16A13Q7RTY0 426 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 UXS1Q8NBZ7 420 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 ZBTB34Q8NCN2 500 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 CXorf58Q96LI9 332 aa8.66□□□□□ -1.02
HMGCS1-204ENST00000507293 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 LOC100506127A0A0U1RQW1 187 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 UPK2O00526 184 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 GPR183P32249 361 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 TAS2R31P59538 309 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 TM4SF20Q53R12 229 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 ZNF773Q6PK81 442 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 UNQ9165/PRO28630Q6UXU0 137 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 TMEM17Q86X19 198 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 OR52B4Q8NGK2 314 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 OR51H1Q8NH63 302 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 AIFM2Q9BRQ8 373 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 AUNIPQ9H7T9 357 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
HMGCS1-204ENST00000507293 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.03
HMGCS1-204ENST00000507293 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 A0A0A6YYH2 397 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 MEIS3P1A6NDR6 274 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 A6NJ64 397 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 S1PR2O95136 353 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 HPRT1P00492 218 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 CLEC3BP05452 202 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 NQO2P16083 231 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 POU2AF1Q16633 256 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 ZNF818PQ6ZRF7 136 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 ZNF502Q8TBZ5 544 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 GGTLC1Q9BX51 225 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 COMMD5Q9GZQ3 224 aa8.64□□□□□ -1.03
HMGCS1-204ENST00000507293 RPA2P15927 270 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 HERV-K104P61576 105 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 ANKRD55Q3KP44 614 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 PLET1Q6UQ28 207 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 OR5AP2Q8NGF4 316 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 OR10W1Q8NGF6 305 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 GIMAP1Q8WWP7 306 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 MARC2Q969Z3 335 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 QTRT1Q9BXR0 403 aaKnown RBP8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 DIABLOQ9NR28 239 aa8.63□□□□□ -1.03
HMGCS1-204ENST00000507293 LOC102724200A0A096LPH7 203 aaPredicted RBP8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 C8orf88P0DMB2 117 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 PTBP1P26599 531 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 CBX5P45973 191 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 ERVK-16P61578 105 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 NEDD8Q15843 81 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 RBPMS2Q6ZRY4 209 aaKnown RBP8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 OR1L6Q8NGR2 347 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 OVOL2Q9BRP0 275 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 ZNF436Q9C0F3 470 aaPredicted RBP8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 IFT46Q9NQC8 304 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 COMMD9Q9P000 198 aa8.62□□□□□ -1.03
HMGCS1-204ENST00000507293 THYN1Q9P016 225 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms