RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 RRASP10301 218 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MUC1P15941 1255 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SPNP16150 400 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 AKR1C4P17516 323 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PRKACAP17612 351 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 HLA-GP17693 338 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 CD34P28906 385 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 BTCP35070 178 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NUP62P37198 522 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MPV17P39210 176 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 CD200P41217 278 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NPBWR2P48146 333 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SNRPD2P62316 118 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TNFAIP6P98066 277 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PAX5Q02548 391 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 BSPH1Q075Z2 132 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF154Q13106 437 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MADCAM1Q13477 382 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TSC22D1Q15714 1073 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MSMO1Q15800 293 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IGFBP7Q16270 282 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NDUFA5Q16718 116 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MICBQ29980 383 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PIGYQ3MUY2 71 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SPATA46Q5T0L3 261 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NCMAPQ5T1S8 102 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 C6orf183Q5T699 404 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC36A1Q7Z2H8 476 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 C6orf201Q7Z4U5 140 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TMED4Q7Z7H5 227 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 LYG2Q86SG7 212 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF561Q8N587 486 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 C12orf45Q8N5I9 185 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SPICQ8N5J4 248 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 DRAXINQ8NBI3 349 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SUMF2Q8NBJ7 301 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4S1Q8NGB4 309 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 OR10AD1Q8NGE0 317 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 OR10K1Q8NGX5 313 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 GRPEL2Q8TAA5 225 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NANPQ8TBE9 248 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF431Q8TF32 576 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MITD1Q8WV92 249 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 AKR1E2Q96JD6 320 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 WFIKKN1Q96NZ8 548 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC6A7Q99884 636 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF2Q9BSG1 426 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 NICN1Q9BSH3 213 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PDCD10Q9BUL8 212 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 GON7Q9BXV9 100 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF436Q9C0F3 470 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB1BQ9H0U4 201 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 DNTTIP1Q9H147 329 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TLNRD1Q9H1K6 362 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 METTL8Q9H825 291 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 HES4Q9HCC6 221 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB18Q9NP72 206 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 DYNLRB1Q9NP97 96 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ASH1LQ9NR48 2969 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SHPKQ9UHJ6 478 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 AK3Q9UIJ7 227 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SH3BGRL2Q9UJC5 107 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PAIP2BQ9ULR5 123 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 RBM7Q9Y580 266 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ALG5Q9Y673 324 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ZFHX4Q86UP3 3567 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 KMT2BQ9UMN6 2715 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 USP24Q9UPU5 2620 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 CCDC88CQ9P219 2028 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 EP300Q09472 2414 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM208BQ5VWN6 2430 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4EA0A075B759 164 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TRGV10A0A0A0MS01 117 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TRBV6-7A0A0A0MS04 114 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 A0A0D9SG52 128 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 A0A1B0GW55 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUXBA0A1W2PPF3 345 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 hADV38S2A0JD32 116 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 C9orf170A2RU37 121 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MEIS3P1A6NDR6 274 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DPRXA6NFQ7 191 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 CRYM-AS1A6NIL9 109 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RFPL4AA6NLU0 287 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2AT4A6NND4 320 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 HMSDA8MTL9 139 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4DF5H284 164 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RFPL4AL1F8VTS6 287 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 F8WDY8 70 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 GPR31O00270 319 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 BET1O15155 118 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 FABP7O15540 132 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SYNGR1O43759 233 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2A4O95047 310 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SFT2D2O95562 160 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2H2O95918 312 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 NAPSAO96009 420 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LHBP01229 141 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPYP01298 95 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV1-46P01743 117 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms