RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SRIP30626 198 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 MLF1P58340 268 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 RAB31Q13636 194 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 TIGITQ495A1 244 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 OR4F17Q8NGA8 305 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 POM121L2Q96KW2 1035 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 IL19Q9UHD0 177 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 CEP250Q9BV73 2442 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 C5orf49A4QMS7 147 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 OR2H2O95918 312 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 DEFA4P12838 97 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 BPIFB3P59826 476 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 PLGLB1Q02325 96 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF146Q15072 292 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 TBR1Q16650 682 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 GCSAMLQ5JQS6 135 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 NUDT10Q8NFP7 164 aa13.23□□□□□ -0.29
SCLT1-208ENST00000506368 IGKV3D-15A0A087WSY6 115 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 TMEM30CPA0ZSE6 113 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 HELTA6NFD8 242 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 CXCL13O43927 109 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 APCSP02743 223 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 CD59P13987 128 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
SCLT1-208ENST00000506368 VAMP3Q15836 100 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 OR8B3Q8NGG8 313 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 NINJ1Q92982 152 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 RCHY1Q96PM5 261 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 OR8B2Q96RD0 313 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 MGST2Q99735 147 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 IZUMO1RA6ND01 250 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 FNDC10F2Z333 226 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 REG1BP48304 166 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 RPL30P62888 115 aaKnown RBP13.22□□□□□ -0.29
SCLT1-208ENST00000506368 OR10D3Q8NH80 312 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 IFI44Q8TCB0 444 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 IMMP1LQ96LU5 166 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF488Q96MN9 340 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 VPS25Q9BRG1 176 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 RTL8AQ9BWD3 113 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 CRIM1Q9NZV1 1036 aa13.22□□□□□ -0.29
SCLT1-208ENST00000506368 LSM4Q9Y4Z0 139 aaKnown RBP13.22□□□□□ -0.29
SCLT1-208ENST00000506368 IGHV1-45A0A0A0MS14 117 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
SCLT1-208ENST00000506368 K7ERU9 68 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 MRPL33O75394 65 aaKnown RBP13.21□□□□□ -0.29
SCLT1-208ENST00000506368 HSBP1O75506 76 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 CCNOP22674 350 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 ERVK11-1P61568 191 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 ARG2P78540 354 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 PLP2Q04941 152 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 CLEC7AQ9BXN2 247 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 SAP30LQ9HAJ7 183 aa13.21□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
SCLT1-208ENST00000506368 RTTNQ86VV8 2226 aa13.21□□□□□ -0.3
SCLT1-208ENST00000506368 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 PRSS46E5RG02 174 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 J3QW42 95 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 PLA2G5P39877 138 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 ETFRF1Q6IPR1 90 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 SMIM12Q96EX1 92 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 DOCK11Q5JSL3 2073 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 PCNX2A6NKB5 2137 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 C17orf98A8MV24 154 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 RRHO14718 337 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 NPY1RP25929 384 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 UBE2G1P62253 170 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 ARF1P84077 181 aaKnown RBP13.2□□□□□ -0.3
SCLT1-208ENST00000506368 EFNB3Q15768 340 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 RNF151Q2KHN1 245 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 CHTOPQ9Y3Y2 248 aaKnown RBP13.2□□□□□ -0.3
SCLT1-208ENST00000506368 U3KQA8 63 aa13.2□□□□□ -0.3
SCLT1-208ENST00000506368 FAM181BA6NEQ2 426 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 NGFP01138 241 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 MIC13Q5XKP0 118 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 C19orf24Q9BVV8 132 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 TRGV8A0A0C4DH27 118 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 BRWD1-AS2P59051 145 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
SCLT1-208ENST00000506368 CNOT1A5YKK6 2376 aaKnown RBP13.18□□□□□ -0.3
SCLT1-208ENST00000506368 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
SCLT1-208ENST00000506368 P04436 131 aa13.18□□□□□ -0.3
SCLT1-208ENST00000506368 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms