RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CXorf58Q96LI9 332 aa6.14□□□□□ -1.43
SNF8-204ENST00000506104 C6orf62Q9GZU0 229 aaPredicted RBP6.14□□□□□ -1.43
SNF8-204ENST00000506104 C8orf4Q9NR00 106 aa6.14□□□□□ -1.43
SNF8-204ENST00000506104 SLC2A9Q9NRM0 540 aa6.14□□□□□ -1.43
SNF8-204ENST00000506104 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
SNF8-204ENST00000506104 LYSTQ99698 3801 aa6.14□□□□□ -1.43
SNF8-204ENST00000506104 IGHV3-49A0A0A0MS15 119 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 TRBV7-1A0A0A6YYK4 115 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 TRAV25A0A0B4J276 109 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 IGKV1D-13A0A0B4J2D9 117 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 E7EUB6 86 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 EBAG9O00559 213 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 MFNGO00587 321 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 RGS13O14921 159 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 DEFB4AO15263 64 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 XRCC3O43542 346 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 RGS10O43665 173 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 IGKV1-13P0DP09 117 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 CTRB1P17538 263 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 HLA-GP17693 338 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 MAS1LP35410 378 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 GNG2P59768 71 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 NANOS2P60321 138 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 RPL8P62917 257 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 RBMS2Q15434 407 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 CDNFQ49AH0 187 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 Q56UQ5 140 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 CTRB2Q6GPI1 263 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 Q6ZWC4 215 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 APRG1Q8IVJ8 170 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 MFSD4AQ8N468 514 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 DMBX1Q8NFW5 382 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 TMEM167AQ8TBQ9 72 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 NUDCD2Q8WVJ2 157 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 MARC2Q969Z3 335 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 FANCD2OSQ96PS1 177 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 HSD17B10Q99714 261 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 ARPC5LQ9BPX5 153 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 COMMD5Q9GZQ3 224 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 FKBP14Q9NWM8 211 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 MRPL27Q9P0M9 148 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 LSM2Q9Y333 95 aaKnown RBP6.13□□□□□ -1.43
SNF8-204ENST00000506104 TPRKBQ9Y3C4 175 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 OR2W1Q9Y3N9 320 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 DMRT1Q9Y5R6 373 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
SNF8-204ENST00000506104 TMEM235A6NFC5 223 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 ERICH4A6NGS2 130 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 OR4C46A6NHA9 309 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 A8MWP6 167 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 UBE2CO00762 179 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 CYB5BO43169 146 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 SLC22A5O76082 557 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 YIF1AO95070 293 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 CTSDP07339 412 aaPredicted RBP6.12□□□□□ -1.43
SNF8-204ENST00000506104 CTXN2P0C2S0 81 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 ZNF735P0CB33 412 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 RAB3BP20337 219 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 PSMA1P25786 263 aaKnown RBP6.12□□□□□ -1.43
SNF8-204ENST00000506104 FXYD4P59646 89 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 ARPC4P59998 168 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 ZNF124Q15973 351 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 WFDC3Q8IUB2 231 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 SPAG16Q8N0X2 631 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 GBGT1Q8N5D6 347 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 CD300LFQ8TDQ1 290 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 RNF183Q96D59 192 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 SPAG8Q99932 426 aaPredicted RBP6.12□□□□□ -1.43
SNF8-204ENST00000506104 RARRES2Q99969 163 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 CENPOQ9BU64 300 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 CCL28Q9NRJ3 127 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 THYN1Q9P016 225 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 TP53TG1Q9Y2A0 90 aa6.12□□□□□ -1.43
SNF8-204ENST00000506104 IGLV11-55A0A075B6I3 123 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 IGHV3OR16-13A0A075B7E8 117 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 IGHV3-74A0A0B4J1X5 117 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 A0A1B0GW64 132 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 IFITM5A6NNB3 132 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 MPTX1A8MV57 137 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 IGLL5B9A064 214 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 SULT1C2O00338 296 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 CASQ2O14958 399 aaPredicted RBP6.11□□□□□ -1.43
SNF8-204ENST00000506104 TGOLN2O43493 480 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 S1PR2O95136 353 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 HLA-DQB1P01920 261 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 OR13C7P0DN81 318 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 PTHLHP12272 177 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 MLLT11Q13015 90 aaPredicted RBP6.11□□□□□ -1.43
SNF8-204ENST00000506104 LGALS9CQ6DKI2 356 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 PUSL1Q8N0Z8 303 aaKnown RBP6.11□□□□□ -1.43
SNF8-204ENST00000506104 OR10W1Q8NGF6 305 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 OR11H2Q8NH07 326 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 OR51H1Q8NH63 302 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 OR4A5Q8NH83 315 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 ZNF502Q8TBZ5 544 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 GALNT14Q96FL9 552 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 MGLLQ99685 303 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 SLC5A7Q9GZV3 580 aa6.11□□□□□ -1.43
SNF8-204ENST00000506104 C5orf66Q9H5L9 145 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms