RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GIG44P09565 113 aaPredicted RBP5□□□□□ -1.61
VCAN-206ENST00000505615 ANXA7P20073 488 aaKnown RBP5□□□□□ -1.61
VCAN-206ENST00000505615 CAPGP40121 348 aa5□□□□□ -1.61
VCAN-206ENST00000505615 ATP5IP56385 69 aaPredicted RBP5□□□□□ -1.61
VCAN-206ENST00000505615 MED21Q13503 144 aa5□□□□□ -1.61
VCAN-206ENST00000505615 TMEM187Q14656 261 aa5□□□□□ -1.61
VCAN-206ENST00000505615 TNXAQ16473 311 aa5□□□□□ -1.61
VCAN-206ENST00000505615 PRSS8Q16651 343 aa5□□□□□ -1.61
VCAN-206ENST00000505615 C12orf74Q32Q52 190 aa5□□□□□ -1.61
VCAN-206ENST00000505615 C10orf55Q5SWW7 151 aa5□□□□□ -1.61
VCAN-206ENST00000505615 DDI2Q5TDH0 399 aa5□□□□□ -1.61
VCAN-206ENST00000505615 ZNF367Q7RTV3 350 aa5□□□□□ -1.61
VCAN-206ENST00000505615 SPATA12Q7Z6I5 190 aa5□□□□□ -1.61
VCAN-206ENST00000505615 DHFR2Q86XF0 187 aa5□□□□□ -1.61
VCAN-206ENST00000505615 NUDT10Q8NFP7 164 aa5□□□□□ -1.61
VCAN-206ENST00000505615 IL1F10Q8WWZ1 152 aa5□□□□□ -1.61
VCAN-206ENST00000505615 NUDT11Q96G61 164 aa5□□□□□ -1.61
VCAN-206ENST00000505615 C4orf36Q96KX1 117 aa5□□□□□ -1.61
VCAN-206ENST00000505615 HARBI1Q96MB7 349 aa5□□□□□ -1.61
VCAN-206ENST00000505615 PDCD1LG2Q9BQ51 273 aa5□□□□□ -1.61
VCAN-206ENST00000505615 PAK1IP1Q9NWT1 392 aaPredicted RBP5□□□□□ -1.61
VCAN-206ENST00000505615 MFSD2BA6NFX1 497 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 CGB1A6NKQ9 187 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 TMEM212A6NML5 194 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 E9PI62 339 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 MPPED1O15442 326 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 PDCD6O75340 191 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 FUT3P21217 361 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 ZNF93P35789 620 aaPredicted RBP4.99□□□□□ -1.61
VCAN-206ENST00000505615 SOX2P48431 317 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 MNAT1P51948 309 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 ELLP55199 621 aaPredicted RBP4.99□□□□□ -1.61
VCAN-206ENST00000505615 KLK9Q2XQG4 91 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 Q5VSD8 79 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 ZNF880Q6PDB4 577 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 IDO2Q6ZQW0 420 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 ZNF767PQ75MW2 155 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 FAM219AQ8IW50 185 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 UBE2DNLQ8IWF7 75 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
VCAN-206ENST00000505615 C6orf62Q9GZU0 229 aaPredicted RBP4.99□□□□□ -1.61
VCAN-206ENST00000505615 VCX2Q9H322 139 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 KCNK15Q9H427 330 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 BANF2Q9H503 90 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 TMEM138Q9NPI0 162 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 OR1A1Q9P1Q5 309 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 KLK9Q9UKQ9 250 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 LRRC42Q9Y546 428 aa4.99□□□□□ -1.61
VCAN-206ENST00000505615 IGHV3-35A0A0C4DH35 117 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 A0A1B0GW64 132 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 SERTM2A0A1B0GWG4 89 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF705EA8MWA4 302 aaPredicted RBP4.98□□□□□ -1.61
VCAN-206ENST00000505615 J3QLW9 94 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 M0R1X1 148 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 GNGT2O14610 69 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 CTSDP07339 412 aaPredicted RBP4.98□□□□□ -1.61
VCAN-206ENST00000505615 MIFP14174 115 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF19P17023 458 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 PSMB6P28072 239 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 UBE2KP61086 200 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 GLT8D1Q68CQ7 371 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 CEACAM19Q7Z692 300 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 SPATA24Q86W54 205 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 OR56B1Q8NGI3 324 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 OR5AK2Q8NH90 309 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 CANT1Q8WVQ1 401 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 TMEM190Q8WZ59 177 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 PTX4Q96A99 478 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ORAI1Q96D31 301 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ASB9Q96DX5 294 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 S100A13Q99584 98 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF184Q99676 751 aaPredicted RBP4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF436Q9C0F3 470 aaPredicted RBP4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF430Q9H8G1 570 aaPredicted RBP4.98□□□□□ -1.61
VCAN-206ENST00000505615 ABRACLQ9P1F3 81 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 UFC1Q9Y3C8 167 aa4.98□□□□□ -1.61
VCAN-206ENST00000505615 DAPL1A0PJW8 107 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 C15orf61A6NNL5 157 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 FAM107AO95990 144 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 NAPSAO96009 420 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 IFNA21P01568 189 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 IFNA17P01571 189 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
VCAN-206ENST00000505615 ZNF735P0CB33 412 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 STAG3L3P0CL85 134 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 MYOD1P15172 320 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 MGMTP16455 207 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 IGFBP3P17936 291 aaPredicted RBP4.97□□□□□ -1.61
VCAN-206ENST00000505615 BDKRB2P30411 391 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 GPR176Q14439 515 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 VMA21Q3ZAQ7 101 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 RNF212Q495C1 297 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 LAMTOR1Q6IAA8 161 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 GLIPR1L1Q6UWM5 242 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 SLC25A42Q86VD7 318 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 LYPD1Q8N2G4 141 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 ACOT12Q8WYK0 555 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms