RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZNF735P0CB33 412 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 MYOD1P15172 320 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 HLA-GP17693 338 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 PSMB6P28072 239 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 CATR1Q13166 79 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 NEDD8Q15843 81 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 DEFB114Q30KQ6 69 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 ZNF773Q6PK81 442 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 TMEM17Q86X19 198 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 CACNG8Q8WXS5 425 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 SLC25A38Q96DW6 304 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 WDR89Q96FK6 387 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 AIFM2Q9BRQ8 373 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 YTHDF1Q9BYJ9 559 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 SRD5A3Q9H8P0 318 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 ZC4H2Q9NQZ6 224 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 DIABLOQ9NR28 239 aa12.06□□□□□ -0.48
PDLIM7-213ENST00000505074 MEIS3P1A6NDR6 274 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 CXorf65A6NEN9 183 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 OR11H12B2RN74 326 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 HIST1H1BP16401 226 aaKnown RBP12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 BRWD1-AS2P59051 145 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 OR4A47Q6IF82 309 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 HOGA1Q86XE5 327 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 OR51H1Q8NH63 302 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 IFT46Q9NQC8 304 aa12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
PDLIM7-213ENST00000505074 A0A1B0GW64 132 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 ZNF785A8K8V0 405 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 SCAND1P57086 179 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 HERV-K104P61576 105 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 AADACL3Q5VUY0 350 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 SLC16A13Q7RTY0 426 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 ZBTB34Q8NCN2 500 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 DMBX1Q8NFW5 382 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 FANCD2OSQ96PS1 177 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 COMMD5Q9GZQ3 224 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 BET1LQ9NYM9 111 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 KIAA1109Q2LD37 5005 aa12.04□□□□□ -0.48
PDLIM7-213ENST00000505074 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 A6NJ64 397 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 LGALS9O00182 355 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 CRYGCP07315 174 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 RPA2P15927 270 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 CTRB1P17538 263 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 CBLN1P23435 193 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 MSMO1Q15800 293 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 ZNF57Q68EA5 555 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 CTRB2Q6GPI1 263 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 CXorf58Q96LI9 332 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 DMRT1Q9Y5R6 373 aa12.03□□□□□ -0.48
PDLIM7-213ENST00000505074 TRBV7-1A0A0A6YYK4 115 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 SCAF4O95104 1147 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 HPRT1P00492 218 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 NQO2P16083 231 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 GPR183P32249 361 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 CBX5P45973 191 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 TAS2R31P59538 309 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 ERVK-16P61578 105 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 ZNF818PQ6ZRF7 136 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 OR5AP2Q8NGF4 316 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 OR52B4Q8NGK2 314 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 TMEM140Q9NV12 185 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 EHFQ9NZC4 300 aa12.02□□□□□ -0.49
PDLIM7-213ENST00000505074 IGLV11-55A0A075B6I3 123 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 TRAV3A0A0B4J244 114 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 TMEM213A2RRL7 107 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 CYB5BO43169 146 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■■■□ 23.2
PDLIM7-213ENST00000505074 S1PR2O95136 353 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 CLEC3BP05452 202 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 OR2B8PP59922 312 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 BTNL8Q6UX41 500 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 UXS1Q8NBZ7 420 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 THYN1Q9P016 225 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 MLXQ9UH92 298 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 KMT2AQ03164 3969 aa12.01□□□□□ -0.49
PDLIM7-213ENST00000505074 CGB1A6NKQ9 187 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 UPK2O00526 184 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 DEDDO75618 318 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 PLET1Q6UQ28 207 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 TSPAN14Q8NG11 270 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 CD300LFQ8TDQ1 290 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 BORCS5Q969J3 196 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 S100A16Q96FQ6 103 aaKnown RBP12□□□□□ -0.49
PDLIM7-213ENST00000505074 HINT2Q9BX68 163 aa12□□□□□ -0.49
PDLIM7-213ENST00000505074 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms