RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 OR4A47Q6IF82 309 aa19.52■□□□□ 0.72
PVT1-201ENST00000504719 TBC1D26Q86UD7 250 aa19.52■□□□□ 0.72
PVT1-201ENST00000504719 OR4C16Q8NGL9 310 aa19.52■□□□□ 0.72
PVT1-201ENST00000504719 SRSF12Q8WXF0 261 aaKnown RBP19.52■□□□□ 0.72
PVT1-201ENST00000504719 PHB2Q99623 299 aa19.52■□□□□ 0.72
PVT1-201ENST00000504719 THAP7Q9BT49 309 aaPredicted RBP19.52■□□□□ 0.72
PVT1-201ENST00000504719 SLC2A9Q9NRM0 540 aa19.52■□□□□ 0.72
PVT1-201ENST00000504719 LSM4Q9Y4Z0 139 aaKnown RBP19.52■□□□□ 0.72
PVT1-201ENST00000504719 SORL1Q92673 2214 aa19.52■□□□□ 0.71
PVT1-201ENST00000504719 A0A0G2JLM5 398 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 C13orf42A0A1B0GVH6 325 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 PI3P19957 117 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 CD69Q07108 199 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 C10orf55Q5SWW7 151 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 COMMD9Q9P000 198 aa19.51■□□□□ 0.71
PVT1-201ENST00000504719 ZNF256Q9Y2P7 627 aaPredicted RBP19.51■□□□□ 0.71
PVT1-201ENST00000504719 DISC1C4P0D8 188 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 LPAR6P43657 344 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 ZNF79Q15937 498 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 POU2AF1Q16633 256 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 ZNF585BQ52M93 769 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 ACSM6Q6P461 480 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 DMBX1Q8NFW5 382 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 ZNF486Q96H40 463 aaPredicted RBP19.5■□□□□ 0.71
PVT1-201ENST00000504719 HRASLSQ9HDD0 168 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 BET1LQ9NYM9 111 aa19.5■□□□□ 0.71
PVT1-201ENST00000504719 SAP30O75446 220 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 RPA2P15927 270 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 Q8N402 240 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 OR6Q1Q8NGQ2 317 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 OR4A5Q8NH83 315 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 MRGPRFQ96AM1 343 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 RANGRFQ9HD47 186 aaPredicted RBP19.49■□□□□ 0.71
PVT1-201ENST00000504719 COA4Q9NYJ1 87 aa19.49■□□□□ 0.71
PVT1-201ENST00000504719 COL7A1Q02388 2944 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 PTBP1P26599 531 aaKnown RBP eCLIP19.48■□□□□ 0.712e-7■■■■■ 36
PVT1-201ENST00000504719 PIGPP57054 158 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 RPL8P62917 257 aaKnown RBP19.48■□□□□ 0.71
PVT1-201ENST00000504719 SPANXN2Q5MJ10 180 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 OR13C8Q8NGS7 320 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 ZFAND1Q8TCF1 268 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 MARCH1Q8TCQ1 289 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 SPIN2AQ99865 258 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 SPIN2BQ9BPZ2 258 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 TMEM140Q9NV12 185 aa19.48■□□□□ 0.71
PVT1-201ENST00000504719 MARCH11A6NNE9 402 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 MPPED1O15442 326 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 MAS1LP35410 378 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 ETV6P41212 452 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 ERVK-16P61578 105 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 RND3P61587 244 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 C11orf87Q6NUJ2 197 aa19.47■□□□□ 0.71
PVT1-201ENST00000504719 ADAD2Q8NCV1 583 aaKnown RBP19.47■□□□□ 0.71
PVT1-201ENST00000504719 TRAV3A0A0B4J244 114 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 KRASP01116 189 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 IL6RP08887 468 aaPredicted RBP19.46■□□□□ 0.71
PVT1-201ENST00000504719 OR9G9P0C7N8 305 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 RPL27AP46776 148 aaKnown RBP19.46■□□□□ 0.71
PVT1-201ENST00000504719 DEFA5Q01523 94 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 OR51S1Q8NGJ8 323 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 TRIM63Q969Q1 353 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 USMG5Q96IX5 58 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 PRRT1Q99946 306 aa19.46■□□□□ 0.71
PVT1-201ENST00000504719 FAM212BQ9NTI7 297 aaPredicted RBP19.46■□□□□ 0.71
PVT1-201ENST00000504719 ANKRD34BA5PLL1 514 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 E7EUB6 86 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 UPK2O00526 184 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 LY86O95711 162 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 MYOD1P15172 320 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 HLA-GP17693 338 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 ZP3P21754 424 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 G6PCP35575 357 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 ZNF343Q6P1L6 599 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 FYTTD1Q96QD9 318 aaKnown RBP19.45■□□□□ 0.7
PVT1-201ENST00000504719 MCUBQ9NWR8 336 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 COPZ2Q9P299 210 aa19.45■□□□□ 0.7
PVT1-201ENST00000504719 HMX3A6NHT5 357 aa19.44■□□□□ 0.7
PVT1-201ENST00000504719 TEX22C9J3V5 150 aa19.44■□□□□ 0.7
PVT1-201ENST00000504719 RBMXL2O75526 392 aaKnown RBP19.44■□□□□ 0.7
PVT1-201ENST00000504719 CTSDP07339 412 aaPredicted RBP19.44■□□□□ 0.7
PVT1-201ENST00000504719 CCDC71LQ8N9Z2 235 aa19.44■□□□□ 0.7
PVT1-201ENST00000504719 SLC2A8Q9NY64 477 aa19.44■□□□□ 0.7
PVT1-201ENST00000504719 A0A1B0GW64 132 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 SERPINE2P07093 398 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 KLF9Q13886 244 aaPredicted RBP19.43■□□□□ 0.7
PVT1-201ENST00000504719 TOMM5Q8N4H5 51 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 TTC9CQ8N5M4 171 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 OR4C12Q96R67 309 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 ELOVL1Q9BW60 279 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 SRRQ9GZT4 340 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 PEF1Q9UBV8 284 aaKnown RBP19.43■□□□□ 0.7
PVT1-201ENST00000504719 SCP2D1Q9UJQ7 156 aa19.43■□□□□ 0.7
PVT1-201ENST00000504719 C14orf166Q9Y224 244 aaKnown RBP19.43■□□□□ 0.7
PVT1-201ENST00000504719 H0Y980 276 aa19.42■□□□□ 0.7
PVT1-201ENST00000504719 IGKV1-39P01597 117 aa19.42■□□□□ 0.7
PVT1-201ENST00000504719 IGKV1D-39P04432 117 aa19.42■□□□□ 0.7
PVT1-201ENST00000504719 SPNP16150 400 aa19.42■□□□□ 0.7
PVT1-201ENST00000504719 AP3S2P59780 193 aa19.42■□□□□ 0.7
PVT1-201ENST00000504719 KLF5Q13887 457 aaPredicted RBP19.42■□□□□ 0.7
PVT1-201ENST00000504719 SURF2Q15527 256 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms