RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RAC3P60763 192 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 UBE2NP61088 152 aaKnown RBP6.36□□□□□ -1.39
NEDD9-208ENST00000504387 RPL8P62917 257 aaKnown RBP6.36□□□□□ -1.39
NEDD9-208ENST00000504387 FOXL1Q12952 345 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 PSG5Q15238 335 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 CENPWQ5EE01 88 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 SAPCD1Q5SSQ6 148 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 PRAMEF5Q5TYX0 476 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 PRAMEF6Q5VXH4 476 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 OR4A47Q6IF82 309 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 FOXL2NBQ6ZUU3 175 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 CENPVQ7Z7K6 275 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-208ENST00000504387 GCNT2Q8N0V5 402 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 FADS6Q8N9I5 356 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 OR2M7Q8NG81 312 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 OR4B1Q8NGF8 309 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 C5orf30Q96GV9 206 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 PLCE1Q9P212 2302 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 KALRNO60229 2985 aa6.36□□□□□ -1.39
NEDD9-208ENST00000504387 OR9G9P0C7N8 305 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 SELENOTP62341 195 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 MLANAQ16655 118 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 STUMQ69YW2 141 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 TRAT1Q6PIZ9 186 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 OR2Y1Q8NGV0 311 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 LSM10Q969L4 123 aaKnown RBP6.35□□□□□ -1.39
NEDD9-208ENST00000504387 HSD17B10Q99714 261 aaKnown RBP6.35□□□□□ -1.39
NEDD9-208ENST00000504387 IL36BQ9NZH7 164 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF891A8MT65 544 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-208ENST00000504387 M0R2Z0 102 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 NEURL1O76050 574 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 NUDT3O95989 172 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 CA2P00918 260 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 MAGEA5P43359 124 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 UQCRFS1P47985 274 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 GNG4P50150 75 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 PCBD1P61457 104 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 TNXAQ16473 311 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ABHD17BQ5VST6 288 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 AMMECR1LQ6DCA0 310 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 MIR17HGQ75NE6 70 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 Q8N976 141 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 SLC35D1Q9NTN3 355 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 LRP4O75096 1905 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF716A6NP11 495 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 TOX4O94842 621 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 IGLL1P15814 213 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 PPOXP50336 477 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF137PP52743 207 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF138P52744 262 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 OR2T6Q8NHC8 308 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 PLEKHA3Q9HB20 300 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF355PQ9NSJ1 428 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 SLC45A2Q9UMX9 530 aa6.35□□□□□ -1.39
NEDD9-208ENST00000504387 CACNA1HO95180 2353 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 PKDREJQ9NTG1 2253 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 HCFC1P51610 2035 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 IGLV3-12A0A075B6K2 115 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 HELTA6NFD8 242 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF324O75467 553 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-208ENST00000504387 MT-CO3P00414 261 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 PLAUP00749 431 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 CSN3P07498 182 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 CELA3BP08861 270 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 USF1P22415 310 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-208ENST00000504387 CA7P43166 264 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 BRWD1-AS2P59051 145 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 ARG2P78540 354 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 SLAQ13239 276 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 SAP25Q8TEE9 199 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 TSKUQ8WUA8 353 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 OR8B2Q96RD0 313 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 HSPB7Q9UBY9 170 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 METRNQ9UJH8 293 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 MED13Q9UHV7 2174 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 TACC2O95359 2948 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 LNP1A1A4G5 178 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 C12orf77C9JDV5 145 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 H3BTX0 84 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 HBZP02008 142 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 MFAP2P55001 183 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 LGALS4P56470 323 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 KLF3P57682 345 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-208ENST00000504387 YPEL3P61236 119 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-208ENST00000504387 GNG3P63215 75 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 TCTEX1D1Q8N7M0 179 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 CNEP1R1Q8N9A8 125 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 OR2D3Q8NGH3 330 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 OR4A16Q8NH70 328 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 NEUROG1Q92886 237 aa6.34□□□□□ -1.39
NEDD9-208ENST00000504387 GALMQ96C23 342 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms