RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 COX19Q49B96 90 aa12.36□□□□□ -0.43
SNF8-203ENST00000504000 ARSJQ5FYB0 599 aaPredicted RBP12.36□□□□□ -0.43
SNF8-203ENST00000504000 ADTRPQ96IZ2 230 aa12.36□□□□□ -0.43
SNF8-203ENST00000504000 TMEM106BQ9NUM4 274 aa12.36□□□□□ -0.43
SNF8-203ENST00000504000 AURKAIP1Q9NWT8 199 aaPredicted RBP12.36□□□□□ -0.43
SNF8-203ENST00000504000 POLR3KQ9Y2Y1 108 aaPredicted RBP12.36□□□□□ -0.43
SNF8-203ENST00000504000 M0R143 59 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 TFF1P04155 84 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 SELLP14151 372 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 NPY1RP25929 384 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 ZNF134P52741 427 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 LGALS4P56470 323 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
SNF8-203ENST00000504000 EDDM3AQ14507 147 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 GCSAMQ8N6F7 178 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 STPG3Q8N7X2 389 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 SLC24A4Q8NFF2 622 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 C19orf24Q9BVV8 132 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 VPS13AQ96RL7 3174 aa12.35□□□□□ -0.43
SNF8-203ENST00000504000 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 M0QZK8 103 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 NUPR1O60356 82 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 RAB4AP20338 218 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 THBS3P49746 956 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 PLA2G2CQ5R387 149 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 PNKDQ8N490 385 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 SDSLQ96GA7 329 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
SNF8-203ENST00000504000 C20orf144Q9BQM9 153 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 GNB1LQ9BYB4 327 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
SNF8-203ENST00000504000 TMEM167BQ9NRX6 74 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 DUSP13Q9UII6 198 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 IGHV1-18A0A0C4DH31 117 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 K7EN84 100 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 LHBP01229 141 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 CNEP1R1Q8N9A8 125 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 TP53TG3Q9ULZ0 132 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
SNF8-203ENST00000504000 TCAPO15273 167 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 MT-ND6P03923 174 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 CRISP2P16562 243 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 BMP5P22003 454 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 LTC4SQ16873 150 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 OR4A47Q6IF82 309 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 VWA1Q6PCB0 445 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 TCF23Q7RTU1 214 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 VKORC1L1Q8N0U8 176 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 SARAFQ96BY9 339 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 SLC45A2Q9UMX9 530 aa12.33□□□□□ -0.44
SNF8-203ENST00000504000 HCFC1P51610 2035 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 CDX4O14627 284 aaPredicted RBP12.32□□□□□ -0.44
SNF8-203ENST00000504000 EREGO14944 169 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 ZNF124Q15973 351 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 SSMEM1Q8WWF3 244 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 SLC35E1Q96K37 410 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
SNF8-203ENST00000504000 ENY2Q9NPA8 101 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
SNF8-203ENST00000504000 IL19Q9UHD0 177 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 PRNDQ9UKY0 176 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 V9GYV3 84 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 CACNA1GO43497 2377 aa12.32□□□□□ -0.44
SNF8-203ENST00000504000 TNFSF13O75888 250 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 LINC00869P0C866 280 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 LINC00310P59036 64 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 C9orf106Q8NAJ2 232 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 LINC00574Q9H8X3 128 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 DMDP11532 3685 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 CA2P00918 260 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 CBLN1P23435 193 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 C17orf58Q2M2W7 97 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 HLA-DRB5Q30154 266 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 C3orf36Q3SXR2 165 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 CT45A1Q5HYN5 189 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 TPTE2P1Q5T6R2 138 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 HES3Q5TGS1 186 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 CT45A3Q8NHU0 189 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 FAM222BQ8WU58 562 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 TBX15Q96SF7 602 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
SNF8-203ENST00000504000 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms