RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SMDT1Q9H4I9 107 aa17.33■□□□□ 0.36
UBE2D3-216ENST00000503742 IGHV2-26A0A0B4J1V2 119 aa17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 IGLV1-47P01700 117 aa17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 PPT1P50897 306 aa17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 TGIF2LXQ8IUE1 241 aa17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 FLYWCH2Q96CP2 140 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 CHODLQ9H9P2 273 aa17.32■□□□□ 0.36
UBE2D3-216ENST00000503742 IL3RAP26951 378 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 OR4C13Q8NGP0 309 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 RCC1LQ96I51 464 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 NPCDR1Q9BY65 106 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 WDR83OSQ9Y284 106 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 TNCP24821 2201 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 RBFOX3A6NFN3 312 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 CD1BP29016 333 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 RAB2AP61019 212 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 PRCDQ00LT1 54 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 ACSM6Q6P461 480 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 FAM122AQ96E09 287 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 RARRES2Q99969 163 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 FKBP11Q9NYL4 201 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 WASHC3Q9Y3C0 194 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 KPTNQ9Y664 436 aa17.31■□□□□ 0.36
UBE2D3-216ENST00000503742 C22orf46C9J442 243 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 RAB11AP62491 216 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 HLA-DRB5Q30154 266 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 SSX7Q7RTT5 188 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 Q8N7P7 452 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 PATZ1Q9HBE1 687 aaKnown RBP17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 ENY2Q9NPA8 101 aa17.3■□□□□ 0.36
UBE2D3-216ENST00000503742 TEX50A0A1B0GTY4 177 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 IGKV1D-33P01593 117 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 IGKV1-33P01594 117 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 PRRX1P54821 245 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 ELLP55199 621 aaPredicted RBP17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 DLX1P56177 255 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 DLK1P80370 383 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 BEND2Q8NDZ0 799 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 SLC24A4Q8NFF2 622 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 OR5B3Q8NH48 314 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 CLEC7AQ9BXN2 247 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 MLXQ9UH92 298 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 NPY1RP25929 384 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 MC5RP33032 325 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 RAB13P51153 203 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 LINC00518Q8N0U6 118 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 RPP25LQ8N5L8 163 aaKnown RBP17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 CLDND2Q8NHS1 167 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 SLC35B3Q9H1N7 401 aa17.29■□□□□ 0.36
UBE2D3-216ENST00000503742 A6NNC1 897 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 IGLV2-23P01705 113 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 LIPFP07098 398 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 HNF4GQ14541 408 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 TMEM167AQ8TBQ9 72 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 UBTD1Q9HAC8 227 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 PLEKHA3Q9HB20 300 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 CA2P00918 260 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 CDKN1AP38936 164 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 NPBWR1P48145 328 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 OR4A5Q8NH83 315 aa17.28■□□□□ 0.36
UBE2D3-216ENST00000503742 MBP02144 154 aa17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 IFNA4P05014 189 aa17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 USF1P22415 310 aaPredicted RBP17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 ZNF506Q5JVG8 444 aa17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 TREML4Q6UXN2 200 aa17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 HINT2Q9BX68 163 aa17.27■□□□□ 0.36
UBE2D3-216ENST00000503742 hCG_1809904A0A1W2PP81 198 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 A0A1W2PPE2 198 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 A0A1W2PR64 198 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 A0A1W2PRV1 198 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 C17orf112F2Z3M2 114 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 BUB1B-PAK6H3BSN5 160 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 MPDU1O75352 247 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 PLA2G5P39877 138 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 RPL8P62917 257 aaKnown RBP17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 ICAM4Q14773 271 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 ZNF787Q6DD87 383 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 LCN15Q6UWW0 184 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 ZNF709Q8N972 641 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 VSTM2AQ8TAG5 236 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 PRB3Q04118 309 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 HAGHQ16775 308 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 FFAR4Q5NUL3 377 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 OR4P4Q8NGL7 312 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 NDUFA4L2Q9NRX3 87 aa17.26■□□□□ 0.35
UBE2D3-216ENST00000503742 ACACBO00763 2458 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 OPN1MWP04001 364 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 OPN1MW2P0DN77 364 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 OPN1MW3P0DN78 364 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 ATP5IP56385 69 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 BSXQ3C1V8 233 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 TMEM88Q6PEY1 159 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 SSBP3Q9BWW4 388 aaPredicted RBP17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 ONECUT1Q9UBC0 465 aa17.25■□□□□ 0.35
UBE2D3-216ENST00000503742 MAP1LC3B2A6NCE7 125 aa17.24■□□□□ 0.35
UBE2D3-216ENST00000503742 NDUFS7O75251 213 aa17.24■□□□□ 0.35
UBE2D3-216ENST00000503742 PAX6P26367 422 aa17.24■□□□□ 0.35
UBE2D3-216ENST00000503742 C1orf159Q96HA4 380 aa17.24■□□□□ 0.35
UBE2D3-216ENST00000503742 RITA1Q96K30 269 aa17.24■□□□□ 0.35
UBE2D3-216ENST00000503742 MAP1LC3BQ9GZQ8 125 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms