RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 CGGBP1Q9UFW8 167 aaPredicted RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 WIPI2Q9Y4P8 454 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TRAV30A0A087WSZ9 112 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 TRAV40A0A0B4J280 105 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 IGHV1-69-2A0A0G2JMI3 117 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 C5orf63A6NC05 138 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A10PA6NDY2 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A18PA6NE21 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A16PA6NEW6 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A20PA6NIJ5 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A8PA6NJQ4 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A7PA6NKC0 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF727A8MUV8 499 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A22PA8MWA6 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A12PA8MX19 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A5PA8MXJ8 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A23PA8MXZ1 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF878C9JN71 531 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 PDE6DO43924 150 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FOXH1O75593 365 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 SCGB1D1O95968 90 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 LCATP04180 440 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 NPSP0C0P6 89 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A15PP0C7V4 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A13PP0C7W8 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A14PP0C7W9 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM90A24PP0C7X0 464 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 B4GALT1P15291 398 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FUT3P21217 361 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 OTX1P32242 354 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 NPBWR2P48146 333 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 PSMB3P49720 205 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 RAB7AP51149 207 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 BIDP55957 195 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 YPEL3P61236 119 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 PPP1CBP62140 327 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 GRB2P62993 217 aaKnown RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 MEF2BQ02080 365 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF92Q03936 586 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF154Q13106 437 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 OR5I1Q13606 314 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 PMCHL1Q16048 86 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 C21orf62-AS1Q17RA5 79 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 MSMPQ1L6U9 139 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 DMRTA1Q5VZB9 504 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 OR8G2PQ6IF36 304 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF343Q6P1L6 599 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 TEX38Q6PEX7 206 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 GLIPR1L1Q6UWM5 242 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF705AQ6ZN79 300 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 Q6ZSR3 168 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 LINC01551Q86U37 167 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 C1orf174Q8IYL3 243 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 OR10S1Q8NGN2 331 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 LINC01006Q8NI28 216 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 CMTM2Q8TAZ6 248 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNRF4Q8WWF5 429 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 RTN4IP1Q8WWV3 396 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 TMEM56Q96MV1 263 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FOXB1Q99853 325 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 SMIM7Q9BQ49 75 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ULBP2Q9BZM5 246 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 DNAJC4Q9NNZ3 241 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 SLC2A9Q9NRM0 540 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 FAM206AQ9NX38 181 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF586Q9NXT0 402 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 PLA2G2EQ9NZK7 142 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 TAAR3PQ9P1P4 343 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ANXA10Q9UJ72 324 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF391Q9UJN7 358 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 ZNF346Q9UL40 294 aaKnown RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 POLR3KQ9Y2Y1 108 aaPredicted RBP4.26□□□□□ -1.73
HTT-202ENST00000502820 TMEM56-RWDD3S4R434 201 aa4.26□□□□□ -1.73
HTT-202ENST00000502820 CADP27708 2225 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 IGHV2-70DA0A0C4DH43 119 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 A0A0U1RQV5 110 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 CBY3A6NI87 242 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 FAM90A26D6RGX4 464 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 C11orf98E9PRG8 122 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SIRPB1O00241 398 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SPRY3O43610 288 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SLC16A7O60669 478 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 NRASP01111 189 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 KRASP01116 189 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 FSHBP01225 129 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 IGHG1P01857 330 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 TTRP02766 147 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 CTXN2P0C2S0 81 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 SCGB1A1P11684 91 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 IRF2P14316 349 aa4.25□□□□□ -1.73
HTT-202ENST00000502820 TMEM11P17152 192 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms