RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 MPLKIPQ8TAP9 179 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 NTN5Q8WTR8 489 aaPredicted RBP2.9□□□□□ -1.94
SUB1-202ENST00000502453 CT55Q8WUE5 264 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 OR2H1Q9GZK4 316 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 ZNF71Q9NQZ8 489 aaPredicted RBP2.9□□□□□ -1.94
SUB1-202ENST00000502453 ITGB4P16144 1822 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 B4DEV8 164 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 CCDC179H3BU77 68 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 M0R1X1 148 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 TBL1XO60907 577 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 IGHG2P01859 326 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 HLA-DQB2P05538 268 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 LGALS1P09382 135 aaKnown RBP2.9□□□□□ -1.94
SUB1-202ENST00000502453 ZNF728P0DKX0 622 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 TAS2R19P59542 299 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 ZNF788Q6ZQV5 615 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 HIST3H2BBQ8N257 126 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 CIARTQ8N365 385 aaPredicted RBP2.9□□□□□ -1.94
SUB1-202ENST00000502453 DEFB125Q8N687 156 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 OR1L1Q8NH94 360 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 C18orf12Q96KH6 178 aa2.9□□□□□ -1.94
SUB1-202ENST00000502453 A0A1B0GV50 99 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 RIIAD1A6NNX1 92 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 PRAC2D3DTV9 90 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 TRAF3IP2O43734 574 aaPredicted RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 ZNF354AO60765 605 aaPredicted RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 UBE2NP61088 152 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 DAZ2Q13117 558 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 LCN8Q6JVE9 175 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 DAZ4Q86SG3 579 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 TMEM229BQ8NBD8 167 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 STARD4Q96DR4 205 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 DERL3Q96Q80 235 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 DAZ1Q9NQZ3 744 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 DAZ3Q9NR90 486 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 CLCF1Q9UBD9 225 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 LAMA3Q16787 3333 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 RGPD2P0DJD1 1756 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 TRAV26-2A0A0B4J265 109 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 IGKV1-8A0A0C4DH67 115 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 SHISA9B4DS77 424 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 SOD3P08294 240 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 GNG4P50150 75 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 GABARAPL2P60520 117 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 SNRPD2P62316 118 aaKnown RBP2.9□□□□□ -1.95
SUB1-202ENST00000502453 ZNF141Q15928 474 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 CCL14Q16627 93 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 GGNQ86UU5 652 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 C11orf53Q8IXP5 236 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 TMEM75Q8N9X5 138 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 NEURL3Q96EH8 262 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 PRADC1Q9BSG0 188 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 HES4Q9HCC6 221 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 LOXHD1Q8IVV2 1947 aa2.9□□□□□ -1.95
SUB1-202ENST00000502453 DOCK5Q9H7D0 1870 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 IGHV1OR15-1A0A075B7D0 117 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 TRAV9-2A0A087WT02 112 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 TMED7-TICAM2A0A0A6YYA0 188 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 SNAPC5O75971 98 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 C1QL1O75973 258 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 HLA-DRB1P01911 266 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 NTF3P20783 257 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 FABP5Q01469 135 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 TGIF1Q15583 401 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 C11orf71Q6IPW1 123 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 ZNF493Q6ZR52 646 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 CLEC20AQ6ZU45 233 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 TCF23Q7RTU1 214 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 ZNF689Q96CS4 500 aaPredicted RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 RNF185Q96GF1 192 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 HYLS1Q96M11 299 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 SDF2Q99470 211 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 MIEN1Q9BRT3 115 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 JPT2Q9H910 190 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 CA10Q9NS85 328 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 ARAP2Q8WZ64 1704 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 UBR2Q8IWV8 1755 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 UPK2O00526 184 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 FFAR1O14842 300 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 TRBV12-3P01733 135 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 IGHG1P01857 330 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 IGHA1P01876 353 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 OR12D1P0DN82 309 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 RPL34P49207 117 aaKnown RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 TIMM10P62072 90 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 GRB2P62993 217 aaKnown RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 RLFQ13129 1914 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 DHRS2Q13268 280 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 KHDC3LQ587J8 217 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 RASL11AQ6T310 242 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 PRSS27Q9BQR3 290 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 KCNIP2Q9NS61 270 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 FAM208AQ9UK61 1670 aaKnown RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 NUP210Q8TEM1 1887 aaPredicted RBP2.89□□□□□ -1.95
SUB1-202ENST00000502453 CDH23Q9H251 3354 aa2.89□□□□□ -1.95
SUB1-202ENST00000502453 COL4A3Q01955 1670 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms