RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ARSJQ5FYB0 599 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-204ENST00000501271 CST9LP1Q5W188 147 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 SSMEM1Q8WWF3 244 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 OR5B12Q96R08 314 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 PCGF1Q9BSM1 259 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 SFXN3Q9BWM7 321 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 AURKAIP1Q9NWT8 199 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-204ENST00000501271 IDI2-AS1Q9NZ38 188 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 ZNRD1Q9P1U0 126 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 IL19Q9UHD0 177 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 LSM4Q9Y4Z0 139 aaKnown RBP8.1□□□□□ -1.11
CLIP1-204ENST00000501271 ANKRD11Q6UB99 2663 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 VENTXO95231 258 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 RD3LP0DJH9 198 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 FABP4P15090 132 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 CD40P25942 277 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 CEACAM8P31997 349 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 THBS3P49746 956 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 MRPS11P82912 194 aaKnown RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 SLC24A4Q8NFF2 622 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 FOXA2Q9Y261 457 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ADGRG4Q8IZF6 3080 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 TRBV23-1A0A0A0MS06 115 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 PGPEP1LA6NFU8 196 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 A8MXE2 369 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 PDE6DO43924 150 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 SOX15O60248 233 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 NDUFB4O95168 129 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 STAG3L2P0CL84 134 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 STAG3L3P0CL85 134 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 NPY1RP25929 384 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ZNF788Q6ZQV5 615 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 LINC01551Q86U37 167 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ZCCHC14Q8WYQ9 949 aaKnown RBP8.09□□□□□ -1.11
CLIP1-204ENST00000501271 TMEM204Q9BSN7 226 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 KCNIP2Q9NS61 270 aa8.09□□□□□ -1.11
CLIP1-204ENST00000501271 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.12
CLIP1-204ENST00000501271 KALRNO60229 2985 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 MAP1BP46821 2468 aaKnown RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 TRAV20A0A0B4J274 112 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 CA2P00918 260 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 IL6RP08887 468 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 CHRNA7P36544 502 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 SELENOVP59797 346 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 HSPE1P61604 102 aaKnown RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 ZNF114Q8NC26 417 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 NPVFQ9HCQ7 196 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 RAB9BQ9NP90 201 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 RIF1Q5UIP0 2472 aaKnown RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 TRBV20OR9-2A0A075B6H5 130 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 ZNF729A6NN14 1252 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 PPP5D1E7EU14 171 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 GGCTO75223 188 aaKnown RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 CRYABP02511 175 aaKnown RBP8.08□□□□□ -1.12
CLIP1-204ENST00000501271 IGKV1-16P04430 117 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 SPATA31B1PQ5VZV4 182 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 FAM57AQ8TBR7 257 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 HIST1H2BLQ99880 126 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 PITPNC1Q9UKF7 332 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 DMRT1Q9Y5R6 373 aa8.08□□□□□ -1.12
CLIP1-204ENST00000501271 CXorf1O96002 111 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 C1QTNF9P0C862 333 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 POU2AF1Q16633 256 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 STPG3Q8N7X2 389 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 ADTRPQ96IZ2 230 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 LINC00574Q9H8X3 128 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 SEPSECSQ9HD40 501 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 OR51B2Q9Y5P1 312 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 DMXL2Q8TDJ6 3036 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 ROS1P08922 2347 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 F6UZH7 168 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 KLK10O43240 276 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 CT45A6P0DMU7 189 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 CT45A5P0DMU8 189 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 CT45A7P0DMV0 189 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 TNFSF4P23510 183 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 SRP14P37108 136 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 CCL8P80075 99 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 EFNB3Q15768 340 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 TEX36Q5VZQ5 186 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 TEPPQ6URK8 271 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 TMEM183AQ8IXX5 376 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 FAM122AQ96E09 287 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 ENY2Q9NPA8 101 aa8.07□□□□□ -1.12
CLIP1-204ENST00000501271 RPUSD1Q9UJJ7 312 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 YTHDF2Q9Y5A9 579 aaKnown RBP8.07□□□□□ -1.12
CLIP1-204ENST00000501271 PCNX1Q96RV3 2341 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 IGFBP2P18065 325 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms