RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 RPL27AP46776 148 aaKnown RBP12.15□□□□□ -0.46
CPNE1-228ENST00000498814 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
CPNE1-228ENST00000498814 DHODHQ02127 395 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
CPNE1-228ENST00000498814 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 TMEM65Q6PI78 240 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 LCNL1Q6ZST4 164 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 MYOZ3Q8TDC0 251 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 GLYATL2Q8WU03 294 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 PHB2Q99623 299 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 A0A1W2PRX2 142 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 E7EUB6 86 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 PLA2G10O15496 165 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 SNAPC5O75971 98 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 NDUFB6O95139 128 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 BRI3O95415 125 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 CDS2O95674 445 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 AKR1C4P17516 323 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 SLC6A1P30531 599 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 BTCP35070 178 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 RAB9AP51151 201 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 CCR6P51684 374 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 TRIM16LQ309B1 348 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 H2BFWTQ7Z2G1 175 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 TSC22D3Q99576 134 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
CPNE1-228ENST00000498814 A0A1B0GW64 132 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 H3BUA1 57 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 TSPAN15O95858 294 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 IGKV1-5P01602 117 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 MYOD1P15172 320 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-228ENST00000498814 OR2B8PP59922 312 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
CPNE1-228ENST00000498814 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 FAM110DQ8TAY7 271 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-228ENST00000498814 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 FKBP11Q9NYL4 201 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
CPNE1-228ENST00000498814 TEX50A0A1B0GTY4 177 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 CGB1A6NKQ9 187 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 LYRM1O43325 122 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 P0C879 139 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 APELAP0DMC3 54 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM187Q14656 261 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 TTC9CQ8N5M4 171 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
CPNE1-228ENST00000498814 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
CPNE1-228ENST00000498814 SRSF8Q9BRL6 282 aaKnown RBP12.12□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM56-RWDD3S4R434 201 aa12.12□□□□□ -0.47
CPNE1-228ENST00000498814 HMX3A6NHT5 357 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 UPK1BO75841 260 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 ANXA3P12429 323 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 AKR1C2P52895 323 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
CPNE1-228ENST00000498814 C18orf65Q6ZTR6 163 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 SELENOHQ8IZQ5 122 aaKnown RBP12.11□□□□□ -0.47
CPNE1-228ENST00000498814 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 OR5B3Q8NH48 314 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 OR4A16Q8NH70 328 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
CPNE1-228ENST00000498814 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
CPNE1-228ENST00000498814 OR51B2Q9Y5P1 312 aa12.11□□□□□ -0.47
CPNE1-228ENST00000498814 MGAM2Q2M2H8 2515 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 TRAPPC2P0DI81 140 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 TRAPPC2BP0DI82 140 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 TPPP2P59282 170 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
CPNE1-228ENST00000498814 SRPXP78539 464 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 FAM219AQ8IW50 185 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 C4orf3Q8WVX3 66 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms