RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 GGTLC1Q9BX51 225 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 MS4A5Q9H3V2 200 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 PLSCR4Q9NRQ2 329 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 IL36BQ9NZH7 164 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 DUSP13Q9UII6 198 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 INTS1Q8N201 2190 aaKnown RBP16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 IGHV3-13P01766 116 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 IGHV3-7P01780 117 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 ESDP10768 282 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 RPL39P5Q59GN2 51 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 MIC13Q5XKP0 118 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 CACNA1GO43497 2377 aa16.29■□□□□ 0.2
NKX2-1-202ENST00000498187 A0A1B0GWJ7 208 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 GRIFINA4D1Z8 144 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 SRRM5B3KS81 715 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 RRHO14718 337 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 RANP62826 216 aaKnown RBP16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 MZT1Q08AG7 82 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 FAM90A1Q86YD7 464 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 IGHV3OR15-7A0A075B7D8 119 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 A8MXE2 369 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 MT-CO2P00403 227 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 CRISP2P16562 243 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 VDAC2P45880 294 aaPredicted RBP16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 ERVK-16P61578 105 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF705AQ6ZN79 300 aaPredicted RBP16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 PIP4P1Q86T03 277 aa16.28■□□□□ 0.2
NKX2-1-202ENST00000498187 PRRC2CQ9Y520 2896 aaKnown RBP16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 PRSS46E5RG02 174 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 HNF1AP20823 631 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 MSMPQ1L6U9 139 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 TOMM20LQ6UXN7 152 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 BHLHA15Q7RTS1 189 aaPredicted RBP16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 LRP11Q86VZ4 500 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 NPVFQ9HCQ7 196 aa16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 ZNF71Q9NQZ8 489 aaPredicted RBP16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 TET2Q6N021 2002 aaPredicted RBP16.27■□□□□ 0.2
NKX2-1-202ENST00000498187 TRAV17A0A0B4J275 112 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 MGST3O14880 152 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 GFRA3O60609 400 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 YPEL1O60688 119 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 TNFSF13O75888 250 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 ZNF134P52741 427 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 YPEL2Q96QA6 119 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 C20orf144Q9BQM9 153 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 MRPL18Q9H0U6 180 aaKnown RBP16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 PROCRQ9UNN8 238 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 LY96Q9Y6Y9 160 aa16.27■□□□□ 0.19
NKX2-1-202ENST00000498187 OTOGLQ3ZCN5 2332 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 TRAV3A0A0B4J244 114 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 CBLN1P23435 193 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 G0S2P27469 103 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 GCHFRP30047 84 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 THBS3P49746 956 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 LOXL3P58215 753 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 RPL31P62899 125 aaKnown RBP16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 Q6ZWC4 215 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 FAM216AQ8WUB2 273 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 STARD4Q96DR4 205 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 TP53TG3Q9ULZ0 132 aa16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 YTHDF2Q9Y5A9 579 aaKnown RBP16.26■□□□□ 0.19
NKX2-1-202ENST00000498187 IGFL2Q6UWQ7 119 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 TEX43Q6ZNM6 134 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 GCSAMQ8N6F7 178 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 ZNRF1Q8ND25 227 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 TMEM68Q96MH6 324 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 UHRF2Q96PU4 802 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 IFI27L2Q9H2X8 130 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 PARD6AQ9NPB6 346 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 MUC6Q6W4X9 2439 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 C9JCJ5 164 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 WT1P19544 449 aaPredicted RBP16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 RHOBP62745 196 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 RELBQ01201 579 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 SPRNQ5BIV9 151 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 PPP1R35Q8TAP8 253 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 S1PR3Q99500 378 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 LSM4Q9Y4Z0 139 aaKnown RBP16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 LOC400499M0QZD8 3231 aa16.25■□□□□ 0.19
NKX2-1-202ENST00000498187 CR1LQ2VPA4 569 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 TPTE2P1Q5T6R2 138 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 ABHD12Q8N2K0 398 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 OR5AU1Q8NGC0 362 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 C11orf52Q96A22 123 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 MIEN1Q9BRT3 115 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 TMEM140Q9NV12 185 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 DKK4Q9UBT3 224 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 SLC25A15Q9Y619 301 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 TRGV10A0A0A0MS01 117 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 SERF1AO75920 110 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 CGAP01215 116 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 IL6RP08887 468 aaPredicted RBP16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 ZNF25P17030 456 aaPredicted RBP16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 CASP6P55212 293 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 TMEM183BQ1AE95 376 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 BAGE3Q86Y29 109 aa16.24■□□□□ 0.19
NKX2-1-202ENST00000498187 BAGE2Q86Y30 109 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms