RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DKKL1Q9UK85 242 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 SMARCA4P51532 1647 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 CUL9Q8IWT3 2517 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 KIAA2026Q5HYC2 2103 aa0.44□□□□□ -2.34
SMC4-227ENST00000497984 TRBV10-2A0A0K0K1G8 114 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 KRT75O95678 551 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 IL3P08700 152 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 OCMP0CE72 109 aaPredicted RBP0.43□□□□□ -2.34
SMC4-227ENST00000497984 RNASE3P12724 160 aaKnown RBP0.43□□□□□ -2.34
SMC4-227ENST00000497984 CSN1S1P47710 185 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 REG1BP48304 166 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 SKP1P63208 163 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 CST9Q5W186 159 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 DCXRQ7Z4W1 244 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 DHFR2Q86XF0 187 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 TBC1D19Q8N5T2 526 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 TMEM251Q8N6I4 163 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 ANKRD7Q92527 254 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 ERMAPQ96PL5 475 aaPredicted RBP0.43□□□□□ -2.34
SMC4-227ENST00000497984 PLEKHJ1Q9NW61 149 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 POLR1DQ9Y2S0 133 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 PXMP4Q9Y6I8 212 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 KMT2DO14686 5537 aa0.43□□□□□ -2.34
SMC4-227ENST00000497984 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
SMC4-227ENST00000497984 DSCAMO60469 2012 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 GLI3P10071 1580 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 IGHV1-69-2A0A0G2JMI3 117 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 TMEM212A6NML5 194 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 OR4C45A6NMZ5 311 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 GOLGA8KD6RF30 607 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 GOLGA8MH3BSY2 632 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 TYMSP04818 313 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 UBBP0CG47 229 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 SULT1A3P0DMM9 295 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 SULT1A4P0DMN0 295 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 S100A7P31151 101 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 HAAOP46952 286 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 SUPT4H1P63272 117 aaKnown RBP0.42□□□□□ -2.34
SMC4-227ENST00000497984 ZNF345Q14585 488 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 TNFAIP8L2Q6P589 184 aaPredicted RBP0.42□□□□□ -2.34
SMC4-227ENST00000497984 C5orf46Q6UWT4 87 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.42□□□□□ -2.34
SMC4-227ENST00000497984 PLEKHG7Q6ZR37 379 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 HIST2H3AQ71DI3 136 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 COMMD7Q86VX2 200 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 Q8N402 240 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 ATP6V1G3Q96LB4 118 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 MAP1LC3AQ9H492 121 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 PAQR5Q9NXK6 330 aaPredicted RBP0.42□□□□□ -2.34
SMC4-227ENST00000497984 AK3Q9UIJ7 227 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 BAIAP2Q9UQB8 552 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 C15orf41Q9Y2V0 281 aa0.42□□□□□ -2.34
SMC4-227ENST00000497984 FSIP2Q5CZC0 6907 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 IGKV1-9A0A0C4DH69 117 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 IRGMA1A4Y4 181 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 GGT3PA6NGU5 568 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 M0QX08 132 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 SDCBPO00560 298 aaPredicted RBP0.41□□□□□ -2.34
SMC4-227ENST00000497984 IGHV3-7P01780 117 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 CLPSP04118 112 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 KRT7P08729 469 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 FAM228BP0C875 321 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 MAP2K4P45985 399 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 OR4D2P58180 307 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 POLR2GP62487 172 aaKnown RBP eCLIP0.41□□□□□ -2.34
SMC4-227ENST00000497984 MLLT11Q13015 90 aaPredicted RBP0.41□□□□□ -2.34
SMC4-227ENST00000497984 RSU1Q15404 277 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 ZNF550Q7Z398 422 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 ZNF565Q8N9K5 539 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 RSL24D1Q9UHA3 163 aaKnown RBP0.41□□□□□ -2.34
SMC4-227ENST00000497984 FUT9Q9Y231 359 aa0.41□□□□□ -2.34
SMC4-227ENST00000497984 NUMA1Q14980 2115 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 C1orf232A0A0U1RR37 186 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 LINC00854A0A1B0GVQ3 168 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 EVPLLA8MZ36 301 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 DISC1C4P0D8 188 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 ITGB1BP1O14713 200 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
SMC4-227ENST00000497984 SLC22A1O15245 554 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 PMP2P02689 132 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 SRP19P09132 144 aaKnown RBP0.4□□□□□ -2.35
SMC4-227ENST00000497984 C8orf88P0DMB2 117 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 COX5BP10606 129 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 RPL12P30050 165 aaKnown RBP0.4□□□□□ -2.35
SMC4-227ENST00000497984 BLVRAP53004 296 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 MAP3K7CLP57077 242 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 RUNX1Q01196 453 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 ZNF846Q147U1 533 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 KISS1Q15726 138 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 SLC51BQ86UW2 128 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 GID4Q8IVV7 300 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 FAM19A2Q8N3H0 131 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 TMEM156Q8N614 296 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 CMTM5Q96DZ9 223 aa0.4□□□□□ -2.35
SMC4-227ENST00000497984 ANKRD17O75179 2603 aaKnown RBP0.39□□□□□ -2.35
SMC4-227ENST00000497984 TECTAO75443 2155 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 NEBP20929 6669 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 CHD2O14647 1828 aaKnown RBP0.39□□□□□ -2.35
SMC4-227ENST00000497984 MICAL3Q7RTP6 2002 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 CXCR6O00574 342 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms