RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 FANCD2OSQ96PS1 177 aa12.65□□□□□ -0.38
TRAPPC3-207ENST00000497251 GGTLC1Q9BX51 225 aa12.65□□□□□ -0.38
TRAPPC3-207ENST00000497251 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
TRAPPC3-207ENST00000497251 RETNQ9HD89 108 aa12.65□□□□□ -0.38
TRAPPC3-207ENST00000497251 THYN1Q9P016 225 aa12.65□□□□□ -0.38
TRAPPC3-207ENST00000497251 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 XRCC3O43542 346 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 NDUFB8O95169 186 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 IGLV2-14P01704 120 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 SMIM18P0DKX4 95 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 CTRB1P17538 263 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 CBX5P45973 191 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 C10orf55Q5SWW7 151 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 CTRB2Q6GPI1 263 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 MFSD4AQ8N468 514 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 OR52B4Q8NGK2 314 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 TCTEX1D2Q8WW35 142 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 WDR89Q96FK6 387 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 FAM110AQ9BQ89 295 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
TRAPPC3-207ENST00000497251 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 TMEM213A2RRL7 107 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 HMX3A6NHT5 357 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 RBFOX2O43251 390 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 C8orf88P0DMB2 117 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 DEFA4P12838 97 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 MYOD1P15172 320 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 NFYAP23511 347 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 RPL30P62888 115 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 CLEC19AQ6UXS0 136 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 WFDC3Q8IUB2 231 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 UXS1Q8NBZ7 420 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 BEST4Q8NFU0 473 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 MRPL27Q9P0M9 148 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-207ENST00000497251 UBE2CO00762 179 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 HLA-GP17693 338 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 ARPC4P59998 168 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 VBP1P61758 197 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 NCS1P62166 190 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 Q6ZWC4 215 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 HSD17B13Q7Z5P4 300 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 SLC38A6Q8IZM9 456 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 UFC1Q9Y3C8 167 aa12.62□□□□□ -0.39
TRAPPC3-207ENST00000497251 IGLV11-55A0A075B6I3 123 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 GABARAPO95166 117 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 HLA-AP01891 365 aaKnown RBP12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 CLEC3BP05452 202 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 APOC4P55056 127 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 GVQW1Q8N7I0 195 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 BORCS5Q969J3 196 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 MRPS26Q9BYN8 205 aaKnown RBP12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 C5orf66Q9H5L9 145 aa12.61□□□□□ -0.39
TRAPPC3-207ENST00000497251 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 NUPR2A6NF83 97 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 E7EUB6 86 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 J3QRK9 145 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 PTBP1P26599 531 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 BMI1P35226 326 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 TAS2R31P59538 309 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 POU2AF1Q16633 256 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 OR1L6Q8NGR2 347 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 VN1R17PQ8TDU5 208 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 WFDC10AQ9H1F0 79 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 MLXQ9UH92 298 aa12.6□□□□□ -0.39
TRAPPC3-207ENST00000497251 KIR2DL5BA0A0G2JN68 375 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 KIR2DL5BA0A0G2JPC4 375 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 HPRT1P00492 218 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 APOA1P02647 267 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 AREGP15514 252 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 BRWD1-AS2P59051 145 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 TAS2R20P59543 309 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 TNFRSF9Q07011 255 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 CATR1Q13166 79 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 CTF1Q16619 201 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 KIR2DL5AQ8N109 375 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 CADM3Q8N126 398 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
TRAPPC3-207ENST00000497251 OR5AP2Q8NGF4 316 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms