RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 KCTD4Q8WVF5 259 aa2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 CGREF1Q99674 301 aa2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 MARVELD1Q9BSK0 173 aa2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 MRPL20Q9BYC9 149 aaKnown RBP2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 UBQLN4Q9NRR5 601 aa2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 Q9Y3F1 56 aa2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 SRRM2Q9UQ35 2752 aaKnown RBP2.61□□□□□ -1.99
EXOSC3-208ENST00000496910 MYH2Q9UKX2 1941 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TNRC6AQ8NDV7 1962 aaKnown RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TET2Q6N021 2002 aaPredicted RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 GMNCA6NCL1 334 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF850A8MQ14 1090 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 INMT-MINDY4F8WBC2 141 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 KPNA4O00629 521 aaPredicted RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 MFSD11O43934 449 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 CGAP01215 116 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ZBTB25P24278 435 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 DIO3P55073 304 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 HERVK_113P61574 105 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 DAD1P61803 113 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 HLA-DRB3P79483 266 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TMEM267Q0VDI3 215 aaPredicted RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ERCC8Q13216 396 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 PAFAH1B3Q15102 231 aaKnown RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 SNRNP35Q16560 246 aaKnown RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TIMM50Q3ZCQ8 353 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ATP6AP1LQ52LC2 224 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TEX30Q5JUR7 227 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TMEM205Q6UW68 189 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 LYPD2Q6UXB3 125 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ACP7Q6ZNF0 438 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 SHISA6Q6ZSJ9 500 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 Q6ZSR6 202 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 GRINAQ7Z429 371 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 EIF4E3Q8N5X7 224 aaKnown RBP2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 DEFB125Q8N687 156 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 OR52L1Q8NGH7 329 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 OR51A2Q8NGJ7 313 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 OR2K2Q8NGT1 345 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 MCFD2Q8NI22 146 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 ACY3Q96HD9 319 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 TIMM17AQ99595 171 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 AIF1LQ9BQI0 150 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 NRIP2Q9BQI9 281 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 OR51I2Q9H344 312 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 PLEKHF2Q9H8W4 249 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 FAM49BQ9NUQ9 324 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 POMPQ9Y244 141 aa2.6□□□□□ -1.99
EXOSC3-208ENST00000496910 PCNX3Q9H6A9 2034 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 IGHV3-74A0A0B4J1X5 117 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 IGKV6-21A0A0C4DH24 114 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 PRORSD1PA6NEY8 169 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 EFCAB10A6NFE3 127 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF705GA8MUZ8 300 aaPredicted RBP2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 TCF21O43680 179 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 PDE6DO43924 150 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 MMP23AO75900 390 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 SERF1AO75920 110 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 GABARAPO95166 117 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 FGF6P10767 208 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 CTLA4P16410 223 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 OMGP23515 440 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 GADD45AP24522 165 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 CD34P28906 385 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 S100GP29377 79 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 DDTP30046 118 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 VEGFCP49767 419 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 MP68P56378 58 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 TCTAP57738 103 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 RAB2AP61019 212 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 RHOBP62745 196 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 SSX1Q16384 188 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 IAH1Q2TAA2 248 aaPredicted RBP2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 CCDC58Q4VC31 144 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 FAM78BQ5VT40 261 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 NXNL2Q5VZ03 156 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF773Q6PK81 442 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 SMARCD3Q6STE5 483 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 MARCH3Q86UD3 253 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF429Q86V71 674 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 SLC25A42Q86VD7 318 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF584Q8IVC4 421 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 STX19Q8N4C7 294 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ST6GALNAC3Q8NDV1 305 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 GRPEL2Q8TAA5 225 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 C11orf40Q8WZ69 217 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 FGF13Q92913 245 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 PTX4Q96A99 478 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 LINC00479Q96M42 142 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 OR52E6Q96RD3 313 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 LRRC61Q9BV99 259 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ULBP3Q9BZM4 244 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 HES4Q9HCC6 221 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 PARP11Q9NR21 331 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 CA10Q9NS85 328 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 TAS2R1Q9NYW7 299 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF581Q9P0T4 197 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 OR52A1Q9UKL2 312 aa2.59□□□□□ -1.99
EXOSC3-208ENST00000496910 ZNF706Q9Y5V0 76 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms