RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 PPYP01298 95 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 CSN3P07498 182 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 IL6RP08887 468 aaPredicted RBP11.48□□□□□ -0.57
NEK4-206ENST00000496822 IGHV4-30-4P0DP06 118 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 RCVRNP35243 200 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 RPL27AP46776 148 aaKnown RBP11.48□□□□□ -0.57
NEK4-206ENST00000496822 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 GPX8Q8TED1 209 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 SMIM4Q8WVI0 70 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 ABHD1Q96SE0 405 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 TSC22D3Q99576 134 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 SOSTQ9BQB4 213 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 IZUMO1RA6ND01 250 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 GSTZ1O43708 216 aaPredicted RBP11.47□□□□□ -0.57
NEK4-206ENST00000496822 AREGP15514 252 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 INPP1P49441 399 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 FXYD4P59646 89 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 Q8N402 240 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 VSTM2AQ8TAG5 236 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 FYTTD1Q96QD9 318 aaKnown RBP11.47□□□□□ -0.57
NEK4-206ENST00000496822 SLC5A7Q9GZV3 580 aa11.47□□□□□ -0.57
NEK4-206ENST00000496822 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
NEK4-206ENST00000496822 PPP5D1E7EU14 171 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 ZNF735P0CB33 412 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 EDN2P20800 178 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 TAS2R46P59540 309 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 AP3S2P59780 193 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 MSMO1Q15800 293 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 TRIQKQ629K1 86 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 TMEM17Q86X19 198 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 SPAG16Q8N0X2 631 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 NECAP1Q8NC96 275 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 OR52I2Q8NH67 350 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 THAP7Q9BT49 309 aaPredicted RBP11.46□□□□□ -0.57
NEK4-206ENST00000496822 CCDC32Q9BV29 185 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 SLC2A9Q9NRM0 540 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 C19orf73Q9NVV2 129 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 MTFP1Q9UDX5 166 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 ZNF257Q9Y2Q1 563 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
NEK4-206ENST00000496822 CGB1A6NKQ9 187 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 NPIPB5A8MRT5 1133 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 IGHV3-23P01764 117 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
NEK4-206ENST00000496822 TBPP20226 339 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 KIR2DS2P43631 304 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 PPP5CP53041 499 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 ZNF79Q15937 498 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 RNASE12Q5GAN4 147 aaKnown RBP11.45□□□□□ -0.58
NEK4-206ENST00000496822 OR4A47Q6IF82 309 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 SLC25A42Q86VD7 318 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 OR5AP2Q8NGF4 316 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 S4R3C0 116 aa11.45□□□□□ -0.58
NEK4-206ENST00000496822 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 H0Y980 276 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 NDUFB8O95169 186 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 HRASP01112 189 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 REG1AP05451 166 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 HLA-GP17693 338 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 MAS1LP35410 378 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 TAS2R19P59542 299 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
NEK4-206ENST00000496822 TATDN3Q17R31 274 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 SGPP2Q8IWX5 399 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 ZBTB34Q8NCN2 500 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 GIMAP1Q8WWP7 306 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 DEDD2Q8WXF8 326 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 EHFQ9NZC4 300 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
NEK4-206ENST00000496822 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
NEK4-206ENST00000496822 A8MZ25 164 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEK4-206ENST00000496822 S1PR2O95136 353 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 CRYGCP07315 174 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 CTRB1P17538 263 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 NAT1P18440 290 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 PSMB6P28072 239 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
NEK4-206ENST00000496822 RFX2P48378 723 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 MECP2P51608 486 aaKnown RBP11.43□□□□□ -0.58
NEK4-206ENST00000496822 CTRB2Q6GPI1 263 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 TMEM229BQ8NBD8 167 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 MUC7Q8TAX7 377 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 ZMAT4Q9H898 229 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 HRASLSQ9HDD0 168 aa11.43□□□□□ -0.58
NEK4-206ENST00000496822 PEMTQ9UBM1 199 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms