RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 CISD2Q8N5K1 135 aaKnown RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 ADTRPQ96IZ2 230 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 FAM215AQ9Y5M1 114 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 TYMSP04818 313 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 GATA4P43694 442 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 TNFAIP6P98066 277 aaPredicted RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 DUX4L9Q6RFH8 374 aaPredicted RBP12.12□□□□□ -0.47
GCOM1-212ENST00000496627 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 FAM222BQ8WU58 562 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
GCOM1-212ENST00000496627 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 GNG10P50151 68 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 RAB31Q13636 194 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
GCOM1-212ENST00000496627 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 TMEM204Q9BSN7 226 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 TMEM14BQ9NUH8 114 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
GCOM1-212ENST00000496627 AMBPP02760 352 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 C1QTNF9P0C862 333 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 LCN2P80188 198 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 COA6Q5JTJ3 125 aaKnown RBP12.11□□□□□ -0.47
GCOM1-212ENST00000496627 STUMQ69YW2 141 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 GCM1Q9NP62 436 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 IDI2-AS1Q9NZ38 188 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 DYSFO75923 2080 aa12.11□□□□□ -0.47
GCOM1-212ENST00000496627 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 GATCO43716 136 aaKnown RBP12.1□□□□□ -0.47
GCOM1-212ENST00000496627 TNFSF4P23510 183 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 IL3RAP26951 378 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 RHOBP62745 196 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 DEFA6Q01524 100 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 STPG3Q8N7X2 389 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 GAFA1Q96PS6 74 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 SCO2A0A1W2PP80 73 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 DVL1O14640 695 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 CA2P00918 260 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 NUBP1P53384 320 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 IGF2-ASQ6U949 168 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 SFRP2Q96HF1 295 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 CCL13Q99616 98 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
GCOM1-212ENST00000496627 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 ZNF320A2RRD8 509 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 GCHFRP30047 84 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
GCOM1-212ENST00000496627 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
GCOM1-212ENST00000496627 TSTD3H0UI37 97 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 MT-CO2P00403 227 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 MYOD1P15172 320 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 PKIAP61925 76 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 EFNB3Q15768 340 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 TCF23Q7RTU1 214 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 FAM216BQ8N7L0 139 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
GCOM1-212ENST00000496627 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 PRNDQ9UKY0 176 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 YTHDF2Q9Y5A9 579 aaKnown RBP12.09□□□□□ -0.47
GCOM1-212ENST00000496627 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
GCOM1-212ENST00000496627 IRF2P14316 349 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 HNF1AP20823 631 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 PLEKHA3Q9HB20 300 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 TP53TG5Q9Y2B4 290 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 ZFHX4Q86UP3 3567 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 IGFBP2P18065 325 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 TIMP3P35625 211 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
GCOM1-212ENST00000496627 PDLIM4P50479 330 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
GCOM1-212ENST00000496627 POU2AF1Q16633 256 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 CORO2AQ92828 525 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
GCOM1-212ENST00000496627 ZMAT5Q9UDW3 170 aaKnown RBP12.08□□□□□ -0.48
GCOM1-212ENST00000496627 TNCP24821 2201 aa12.08□□□□□ -0.48
GCOM1-212ENST00000496627 TRBV20OR9-2A0A075B6H5 130 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 CNN1P51911 297 aaKnown RBP12.07□□□□□ -0.48
GCOM1-212ENST00000496627 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 Q6ZS92 163 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 TMEM144Q7Z5S9 345 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 SGMS2Q8NHU3 365 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 ZCCHC14Q8WYQ9 949 aaKnown RBP12.07□□□□□ -0.48
GCOM1-212ENST00000496627 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
GCOM1-212ENST00000496627 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms