RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CDH23	Q9H251	3354 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	TNRC6A	Q8NDV7	1962 aa	Known RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	LOC107984156	A0A0G2JMH3	177 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549		A0A1W2PQM1	296 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549		A8MWL6	223 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	IFI6	P09912	130 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	RBM11	P57052	281 aa	Known RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	GCSAML	Q5JQS6	135 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ARL17A	Q8IVW1	177 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	STPG3	Q8N7X2	389 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF501	Q96CX3	271 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	CDX2	Q99626	313 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	C19orf24	Q9BVV8	132 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ALKBH4	Q9NXW9	302 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	IL36RN	Q9UBH0	155 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF716	A6NP11	495 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	NRG2	O14511	850 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SIVA1	O15304	175 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SP9	P0CG40	484 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	TFF3	Q07654	80 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF816	Q0VGE8	651 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZDHHC23	Q8IYP9	409 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	OR13C6P	Q8NH95	151 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	DEFB118	Q96PH6	123 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	FAM60A	Q9NP50	221 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	TMEM140	Q9NV12	185 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	IL4	P05112	153 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF137P	P52743	207 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	RPL32	P62910	135 aa	Known RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	EGR4	Q05215	589 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SSMEM1	Q8WWF3	244 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	RAB1C	Q92928	201 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SPATA25	Q9BR10	227 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	RABAC1	Q9UI14	185 aa		6.91	□□□□□ -1.3
CRNKL1-205	ENST00000496549	VCAN	P13611	3396 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	C5orf49	A4QMS7	147 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	PVR	P15151	417 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	DEFB110	Q30KQ9	67 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	C5orf47	Q569G3	176 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	BCL6B	Q8N143	479 aa	Predicted RBP	6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	ZNF114	Q8NC26	417 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SCARF2	Q96GP6	870 aa	Predicted RBP	6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	NGB	Q9NPG2	151 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549	SCRT2	Q9NQ03	307 aa		6.9	□□□□□ -1.3
CRNKL1-205	ENST00000496549		A0A0J9YY10	115 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SMAD7	O15105	426 aa	Known RBP	6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	GDF1	P27539	372 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PTGDS	P41222	190 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RSPO2	Q6UXX9	243 aa	Predicted RBP	6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ARPC1A	Q92747	370 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	WNT6	Q9Y6F9	365 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	HELZ	P42694	1942 aa	Known RBP	6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C17orf51	A8MQB3	221 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IGHV3-7	P01780	117 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	OR1D5	P58170	312 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM110C	Q1W6H9	321 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF414	Q96IQ9	312 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TAAR6	Q96RI8	345 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	HIST1H4G	Q99525	98 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C1QTNF4	Q9BXJ3	329 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	AICDA	Q9GZX7	198 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF355P	Q9NSJ1	428 aa		6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TNRC18	O15417	2968 aa	Predicted RBP	6.9	□□□□□ -1.31
CRNKL1-205	ENST00000496549	DRD3	P35462	400 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PAX9	P55771	341 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	UFSP1	Q6NVU6	142 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZBTB34	Q8NCN2	500 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF502	Q8TBZ5	544 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SRSF8	Q9BRL6	282 aa	Known RBP	6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RAB1B	Q9H0U4	201 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RARRES3	Q9UL19	164 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM8B	A6NDV4	472 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549		P01737	135 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SCT	P09683	121 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ERVK11-1	P61568	191 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	KLRD1	Q13241	179 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM116	Q8NCL8	245 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	EYS	Q5T1H1	3165 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PRKN	O60260	465 aa	Predicted RBP	6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM52B	Q4KMG9	183 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	MIC13	Q5XKP0	118 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SLC23A3	Q6PIS1	610 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549		Q8N976	141 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ST8SIA1	Q92185	356 aa		6.89	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PLXND1	Q9Y4D7	1925 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IGKV1D-33	P01593	117 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IGKV1-33	P01594	117 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PRSS1	P07477	247 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ATP5G2	Q06055	141 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ARL16	Q0P5N6	197 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ATP5L2	Q7Z4Y8	100 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF611	Q8N823	705 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	H1FX	Q92522	213 aa	Known RBP	6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	KCNK17	Q96T54	332 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	NDFIP1	Q9BT67	221 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IGHM	P01871	453 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	CCL7	P80098	99 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C3AR1	Q16581	482 aa		6.88	□□□□□ -1.31

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