RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 ARPC4P59998 168 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 GABARAPL2P60520 117 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 TIMM50Q3ZCQ8 353 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 TM4SF20Q53R12 229 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 UNQ9165/PRO28630Q6UXU0 137 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 SPARTQ8N0X7 666 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 UXS1Q8NBZ7 420 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 OR52B4Q8NGK2 314 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 OR13F1Q8NGS4 319 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 OR5H6Q8NGV6 325 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 RNF167Q9H6Y7 350 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
USF1-207ENST00000496363 TRAV18A0A075B6X5 111 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 SULT1C2O00338 296 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 SCGNO76038 276 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 DHFRP00374 187 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 CLEC3BP05452 202 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 DEFA4P12838 97 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 GPR183P32249 361 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 SDC2P34741 201 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 OR2B8PP59922 312 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 MXD1Q05195 221 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 KLK9Q2XQG4 91 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 FAM106AQ4KMX7 169 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 ZNF773Q6PK81 442 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 SPAG16Q8N0X2 631 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 BEST4Q8NFU0 473 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 SLC25A38Q96DW6 304 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 HRASLSQ9HDD0 168 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 BET1LQ9NYM9 111 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 KLK9Q9UKQ9 250 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 RAB26Q9ULW5 256 aa9.74□□□□□ -0.85
USF1-207ENST00000496363 IGLC7A0M8Q6 106 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 PPYP01298 95 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 RPA2P15927 270 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
USF1-207ENST00000496363 FXYD4P59646 89 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 TPRA1Q86W33 373 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 HOGA1Q86XE5 327 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 OVOL2Q9BRP0 275 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 SLC5A7Q9GZV3 580 aa9.73□□□□□ -0.85
USF1-207ENST00000496363 LOC102724200A0A096LPH7 203 aaPredicted RBP9.72□□□□□ -0.85
USF1-207ENST00000496363 TRBV7-1A0A0A6YYK4 115 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 MEIS3P1A6NDR6 274 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 UPK2O00526 184 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 MRPS14O60783 128 aaKnown RBP9.72□□□□□ -0.85
USF1-207ENST00000496363 ZNF585BQ52M93 769 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 IDNKQ5T6J7 187 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 OR10W1Q8NGF6 305 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 OR4A5Q8NH83 315 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 ZNF502Q8TBZ5 544 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 CXorf58Q96LI9 332 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 SSR3Q9UNL2 185 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 VPS13DQ5THJ4 4388 aa9.72□□□□□ -0.85
USF1-207ENST00000496363 RBFOX2O43251 390 aaKnown RBP eCLIP9.71□□□□□ -0.86
USF1-207ENST00000496363 S1PR2O95136 353 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 TAS2R31P59538 309 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
USF1-207ENST00000496363 MSMO1Q15800 293 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 ZNF818PQ6ZRF7 136 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 TMEM17Q86X19 198 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 OR1L6Q8NGR2 347 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 OR51H1Q8NH63 302 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 AUNIPQ9H7T9 357 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 TMEM140Q9NV12 185 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 UBQLN2Q9UHD9 624 aa9.71□□□□□ -0.86
USF1-207ENST00000496363 IGHV3-21A0A0B4J1V1 117 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 LOC100506127A0A0U1RQW1 187 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 HPRT1P00492 218 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 NQO2P16083 231 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 CATR1Q13166 79 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 POU2AF1Q16633 256 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 ANKRD55Q3KP44 614 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
USF1-207ENST00000496363 ZBTB34Q8NCN2 500 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 FCGR1BQ92637 280 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 COMMD5Q9GZQ3 224 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 ETV7Q9Y603 341 aa9.7□□□□□ -0.86
USF1-207ENST00000496363 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 A0A0J9YWU9 116 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 OR2T8A6NH00 312 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 TGOLN2O43493 480 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 PTBP1P26599 531 aaKnown RBP eCLIP9.69□□□□□ -0.86
USF1-207ENST00000496363 WT1-ASQ06250 92 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 AADACL3Q5VUY0 350 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 TMEM190Q8WZ59 177 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 AIFM2Q9BRQ8 373 aa9.69□□□□□ -0.86
USF1-207ENST00000496363 QTRT1Q9BXR0 403 aaKnown RBP9.69□□□□□ -0.86
USF1-207ENST00000496363 ZNF436Q9C0F3 470 aaPredicted RBP9.69□□□□□ -0.86
USF1-207ENST00000496363 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms