RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 AMTNQ6UX39 209 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 C12orf45Q8N5I9 185 aaPredicted RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 OR11G2Q8NGC1 345 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SGMS2Q8NHU3 365 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 FNDC9Q8TBE3 224 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 KLF14Q8TD94 323 aaPredicted RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 ZNF721Q8TF20 911 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SLC7A6Q92536 515 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 PLA2G12AQ9BZM1 189 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 WDR61Q9GZS3 305 aaKnown RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 CYTL1Q9NRR1 136 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 FBXL12Q9NXK8 326 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 TVP23BQ9NYZ1 205 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 LINC00588Q9Y4M8 146 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 S4R3C0 116 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 TRIP11Q15643 1979 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 ROBO3Q96MS0 1386 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 NEO1Q92859 1461 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 TRAV9-1A0A075B6T8 112 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 A0A0J9YY10 115 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 TMEM269A0A1B0GVZ9 245 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 A0A1B0GX78 115 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 A0A1W2PQ67 120 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 MAP1LC3B2A6NCE7 125 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 A8MWP4 228 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 H3BMM0 161 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 CPMP14384 443 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 RPS4Y1P22090 263 aaKnown RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 CRABP2P29373 138 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 CRABP1P29762 137 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 TAS2R20P59543 309 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 RPS20P60866 119 aaKnown RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 NCALDP61601 193 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 C16orf47Q6ZP98 133 aaPredicted RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 GPHB5Q86YW7 130 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 OR13C4Q8NGS5 318 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 OR4K13Q8NH42 304 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 OR10J5Q8NHC4 309 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 RBPMSQ93062 196 aaKnown RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 UBE2WQ96B02 151 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 TOMM6Q96B49 74 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 SERPINI1Q99574 410 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 TSSK6Q9BXA6 273 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 RSPO3Q9BXY4 272 aaPredicted RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 IMUPQ9GZP8 106 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 MAP1LC3BQ9GZQ8 125 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 SLC23A2Q9UGH3 650 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 LAMTOR3Q9UHA4 124 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 SNX12Q9UMY4 172 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 MIA2Q96PC5 1412 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 DENND4BO75064 1496 aaPredicted RBP2.05□□□□□ -2.08
CLK1-214ENST00000496205 PLA2R1Q13018 1463 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 OTOFQ9HC10 1997 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 SVILO95425 2214 aa2.05□□□□□ -2.08
CLK1-214ENST00000496205 TRAV4A0A0B4J268 109 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 DPRXA6NFQ7 191 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 RPL36A-HNRNPH2H7BZ11 118 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 KPNA4O00629 521 aaPredicted RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 UBE2L6O14933 153 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 PLA2G10O15496 165 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 SLC25A20O43772 301 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 MFSD11O43934 449 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 IGKV1D-33P01593 117 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 IGKV1-33P01594 117 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 IGHV3-53P01767 116 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 C1QAP02745 245 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 ALDH3A1P30838 453 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 RPL27AP46776 148 aaKnown RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 SERPINB10P48595 397 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 TSPEAR-AS2P59090 65 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 GNG5P63218 68 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 HBA1P69905 142 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 CCL20P78556 96 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 DEFA6Q01524 100 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 AKR1C1Q04828 323 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 NUP160Q12769 1436 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 BIKQ13323 160 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 TMEM128Q5BJH2 165 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 LYRM7Q5U5X0 104 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 FMN1Q68DA7 1419 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 RPL22L1Q6P5R6 122 aaKnown RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 Q6Q795 121 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 TICRRQ7Z2Z1 1910 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 CLVS1Q8IUQ0 354 aaPredicted RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 FAM24BQ8N5W8 94 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 ZNF283Q8N7M2 679 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 NUP35Q8NFH5 326 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 C11orf40Q8WZ69 217 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 PLEKHB2Q96CS7 222 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 DNAJC30Q96LL9 226 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 LYSMD1Q96S90 227 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 UPK3BQ9BT76 320 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 C11orf1Q9H5F2 150 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 ZNF230Q9UIE0 474 aaPredicted RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 BAZ1BQ9UIG0 1483 aaKnown RBP2.04□□□□□ -2.08
CLK1-214ENST00000496205 ICOSQ9Y6W8 199 aa2.04□□□□□ -2.08
CLK1-214ENST00000496205 COL27A1Q8IZC6 1860 aaPredicted RBP2.03□□□□□ -2.08
CLK1-214ENST00000496205 KIF1BO60333 1816 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms