RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 FAM220AQ7Z4H9 259 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 C8orf31Q8N9H6 132 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 OR4D6Q8NGJ1 314 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 OR51A2Q8NGJ7 313 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 OR10G7Q8NGN6 311 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 PCNPQ8WW12 178 aaKnown RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 RTN4IP1Q8WWV3 396 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 IL4I1Q96RQ9 567 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 TM2D3Q9BRN9 247 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 FAM192AQ9GZU8 254 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 HIPK2Q9H2X6 1198 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 GNB4Q9HAV0 340 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 RHOFQ9HBH0 211 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 VCX3AQ9NNX9 186 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 IDI2-AS1Q9NZ38 188 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 WARS2Q9UGM6 360 aaKnown RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 ZNF107Q9UII5 783 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 GNG8Q9UK08 70 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ZNF221Q9UK13 617 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 RPH3ALQ9UNE2 315 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 POMPQ9Y244 141 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 CHTOPQ9Y3Y2 248 aaKnown RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 MEIKINA0A087WXM9 373 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 A0A1W2PPE3 182 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 FUOMA2VDF0 154 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 L7N2F9 121 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 TOR1AO14656 332 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 SOX15O60248 233 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 PFDN1O60925 122 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 DEDDO75618 318 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 FAM107AO95990 144 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 DBTP11182 482 aaKnown RBP3.19□□□□□ -1.9
VPS52-222ENST00000495981 VHLP40337 213 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 CRIP2P52943 208 aaPredicted RBP3.19□□□□□ -1.9
VPS52-222ENST00000495981 ATP1B3P54709 279 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 RBM11P57052 281 aaKnown RBP3.19□□□□□ -1.9
VPS52-222ENST00000495981 SLC35B1P78383 322 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 HES1Q14469 280 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 GNMTQ14749 295 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 KISS1Q15726 138 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 LTC4SQ16873 150 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 TIGITQ495A1 244 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 PAN3Q58A45 887 aaKnown RBP3.19□□□□□ -1.9
VPS52-222ENST00000495981 ZNF691Q5VV52 312 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 UQCC3Q6UW78 93 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
VPS52-222ENST00000495981 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 GAPTQ8N292 157 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 LINC00311Q8N616 119 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 ZNF565Q8N9K5 539 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 PXT1Q8NFP0 134 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 STXBP6Q8NFX7 210 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 OR10A7Q8NGE5 316 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 OR1L4Q8NGR5 311 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 UBALD1Q8TB05 177 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 CNIH3Q8TBE1 160 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 MRGPRDQ8TDS7 321 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 FGGYQ96C11 551 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 THTPAQ9BU02 230 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 C8orf4Q9NR00 106 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 IL36GQ9NZH8 169 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 THYN1Q9P016 225 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 FBXO7Q9Y3I1 522 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 VPS13BQ7Z7G8 4022 aa3.19□□□□□ -1.9
VPS52-222ENST00000495981 IGHV7-81A0A0B4J1V7 117 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 A0A1B0GVG6 124 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 TMEM30CPA0ZSE6 113 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 MPTX1A8MV57 137 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 G3V2T6 193 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 G3V318 75 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 SDCBPO00560 298 aaPredicted RBP3.18□□□□□ -1.9
VPS52-222ENST00000495981 GNGT2O14610 69 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 MOSP00540 346 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 GAPDHP04406 335 aaKnown RBP3.18□□□□□ -1.9
VPS52-222ENST00000495981 PRSS1P07477 247 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 OR8U8P0C7N1 319 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 SPNP16150 400 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
VPS52-222ENST00000495981 KCNJ3P48549 501 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 ZNF616Q08AN1 781 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 ECSCRQ19T08 205 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 RGS21Q2M5E4 152 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 DNAL1Q4LDG9 190 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 C6orf226Q5I0X4 101 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 TMEM244Q5VVB8 128 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 XAF1Q6GPH4 301 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 ASCL4Q6XD76 172 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 ZNF497Q6ZNH5 498 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 SUMF2Q8NBJ7 301 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 OR10K1Q8NGX5 313 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 OR10X1Q8NGY0 326 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 RFESDQ8TAC1 157 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 SCARB1Q8WTV0 552 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 ARPC1AQ92747 370 aa3.18□□□□□ -1.9
VPS52-222ENST00000495981 STMN2Q93045 179 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms